RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KLF5Q13887 457 aaPredicted RBP16.13■□□□□ 0.17
VPS13B-204ENST00000441350 ZNF726P1Q15940 193 aa16.13■□□□□ 0.17
VPS13B-204ENST00000441350 FAM213BQ8TBF2 198 aa16.13■□□□□ 0.17
VPS13B-204ENST00000441350 DPF1Q92782 380 aa16.13■□□□□ 0.17
VPS13B-204ENST00000441350 DUX3Q96PT4 197 aa16.13■□□□□ 0.17
VPS13B-204ENST00000441350 HIGD1AQ9Y241 93 aa16.13■□□□□ 0.17
VPS13B-204ENST00000441350 RHOBP62745 196 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 NSUN5P1Q3KNT7 163 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 FAM78BQ5VT40 261 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 FAM122CQ6P4D5 195 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 UHRF2Q96PU4 802 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 RNF2Q99496 336 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 C20orf24Q9BUV8 137 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 ACTR3CQ9C0K3 210 aaPredicted RBP16.12■□□□□ 0.17
VPS13B-204ENST00000441350 ZNF705EA8MWA4 302 aaPredicted RBP16.12■□□□□ 0.17
VPS13B-204ENST00000441350 CCL24O00175 119 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 LGALS9O00182 355 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 SLURP1P55000 103 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 SPATA31B1PQ5VZV4 182 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 SSX7Q7RTT5 188 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 LINC00305Q7Z4B0 112 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 REC114Q7Z4M0 266 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 LRRC20Q8TCA0 184 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 SAT2Q96F10 170 aaPredicted RBP16.12■□□□□ 0.17
VPS13B-204ENST00000441350 RABAC1Q9UI14 185 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 FUT9Q9Y231 359 aa16.12■□□□□ 0.17
VPS13B-204ENST00000441350 ZNF320A2RRD8 509 aa16.11■□□□□ 0.17
VPS13B-204ENST00000441350 CDC34P49427 236 aaPredicted RBP16.11■□□□□ 0.17
VPS13B-204ENST00000441350 MORN5Q5VZ52 161 aa16.11■□□□□ 0.17
VPS13B-204ENST00000441350 C1QL4Q86Z23 238 aa16.11■□□□□ 0.17
VPS13B-204ENST00000441350 RAB24Q969Q5 203 aa16.11■□□□□ 0.17
VPS13B-204ENST00000441350 MRPL32Q9BYC8 188 aaKnown RBP16.11■□□□□ 0.17
VPS13B-204ENST00000441350 SLC25A39Q9BZJ4 359 aaPredicted RBP16.11■□□□□ 0.17
VPS13B-204ENST00000441350 SLC25A22Q9H936 323 aa16.11■□□□□ 0.17
VPS13B-204ENST00000441350 CTXND1A0A1B0GTU2 59 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 A0A1W2PPV4 95 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 K7EMT4 169 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 CRYBB3P26998 211 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 SYNJ2BPP57105 145 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 MIR17HGQ75NE6 70 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 METTL26Q96S19 204 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 SHANK2-AS3Q9BTD1 123 aa16.1■□□□□ 0.17
VPS13B-204ENST00000441350 H3BRN7 92 aa16.09■□□□□ 0.17
VPS13B-204ENST00000441350 ZNF207O43670 478 aaKnown RBP16.09■□□□□ 0.17
VPS13B-204ENST00000441350 NMBP08949 121 aa16.09■□□□□ 0.17
VPS13B-204ENST00000441350 MBD3L1Q8WWY6 194 aa16.09■□□□□ 0.17
VPS13B-204ENST00000441350 ZNF747Q9BV97 191 aa16.09■□□□□ 0.17
VPS13B-204ENST00000441350 U3KQE9 123 aa16.09■□□□□ 0.17
VPS13B-204ENST00000441350 A8MWP6 167 aa16.08■□□□□ 0.17
VPS13B-204ENST00000441350 EIF3GO75821 320 aaKnown RBP eCLIP16.08■□□□□ 0.17
VPS13B-204ENST00000441350 NPPCP23582 126 aa16.08■□□□□ 0.17
VPS13B-204ENST00000441350 PCNPQ8WW12 178 aaKnown RBP16.08■□□□□ 0.17
VPS13B-204ENST00000441350 SCRT1Q9BWW7 348 aa16.08■□□□□ 0.17
VPS13B-204ENST00000441350 DAZ1Q9NQZ3 744 aaKnown RBP16.08■□□□□ 0.17
VPS13B-204ENST00000441350 UFC1Q9Y3C8 167 aa16.08■□□□□ 0.17
VPS13B-204ENST00000441350 TRAV5A0A0B4J249 113 aa16.08■□□□□ 0.16
VPS13B-204ENST00000441350 H2AFB1P0C5Y9 115 aa16.08■□□□□ 0.16
VPS13B-204ENST00000441350 MYCNOSP40205 109 aa16.08■□□□□ 0.16
VPS13B-204ENST00000441350 BLOC1S1P78537 153 aa16.08■□□□□ 0.16
VPS13B-204ENST00000441350 TM4SF20Q53R12 229 aa16.08■□□□□ 0.16
VPS13B-204ENST00000441350 S100A7AQ86SG5 101 aa16.08■□□□□ 0.16
VPS13B-204ENST00000441350 DLX4Q92988 240 aaPredicted RBP16.08■□□□□ 0.16
VPS13B-204ENST00000441350 FAM167A-AS1Q96KT0 104 aa16.08■□□□□ 0.16
VPS13B-204ENST00000441350 ZNF98A6NK75 572 aa16.07■□□□□ 0.16
VPS13B-204ENST00000441350 HMGB3O15347 200 aaKnown RBP16.07■□□□□ 0.16
VPS13B-204ENST00000441350 STAG3L2P0CL84 134 aa16.07■□□□□ 0.16
VPS13B-204ENST00000441350 STAG3L3P0CL85 134 aa16.07■□□□□ 0.16
VPS13B-204ENST00000441350 C8orf88P0DMB2 117 aa16.07■□□□□ 0.16
VPS13B-204ENST00000441350 TRAV1-1A0A0B4J248 108 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 TMEM213A2RRL7 107 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 MAP1LC3B2A6NCE7 125 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 BUB3O43684 328 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 APOHP02749 345 aaPredicted RBP16.06■□□□□ 0.16
VPS13B-204ENST00000441350 S100A7P31151 101 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 LEMD1Q68G75 181 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 LCN15Q6UWW0 184 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 SFT2D1Q8WV19 159 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 SLC25A2Q9BXI2 301 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 MAP1LC3BQ9GZQ8 125 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 TECRQ9NZ01 308 aaKnown RBP16.06■□□□□ 0.16
VPS13B-204ENST00000441350 COL6A5A8TX70 2615 aa16.06■□□□□ 0.16
VPS13B-204ENST00000441350 RAB14P61106 215 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 CLLU1Q5K131 121 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 C12orf54Q6X4T0 127 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 LYPD6BQ8NI32 183 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 PFDN2Q9UHV9 154 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 IGHV7-4-1A0A0J9YVY3 117 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 TAS2R45P59539 299 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 C3orf56Q8N813 242 aa16.05■□□□□ 0.16
VPS13B-204ENST00000441350 IGHV3-49A0A0A0MS15 119 aa16.04■□□□□ 0.16
VPS13B-204ENST00000441350 KHDC3LQ587J8 217 aa16.04■□□□□ 0.16
VPS13B-204ENST00000441350 C1orf194Q5T5A4 169 aa16.04■□□□□ 0.16
VPS13B-204ENST00000441350 OR9G4Q8NGQ1 327 aa16.04■□□□□ 0.16
VPS13B-204ENST00000441350 ZNF503Q96F45 646 aa16.04■□□□□ 0.16
VPS13B-204ENST00000441350 SMPXQ9UHP9 88 aa16.04■□□□□ 0.16
VPS13B-204ENST00000441350 RNF24Q9Y225 148 aa16.04■□□□□ 0.16
VPS13B-204ENST00000441350 WNK1Q9H4A3 2382 aa16.03■□□□□ 0.16
VPS13B-204ENST00000441350 IGHV3OR16-13A0A075B7E8 117 aa16.03■□□□□ 0.16
VPS13B-204ENST00000441350 IGHV3-74A0A0B4J1X5 117 aa16.03■□□□□ 0.16
VPS13B-204ENST00000441350 ARL14EPLP0DKL9 152 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms