RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ZADH2Q8N4Q0 377 aa13.57□□□□□ -0.24
PMS1-213ENST00000441310 NEU4Q8WWR8 484 aaPredicted RBP13.57□□□□□ -0.24
PMS1-213ENST00000441310 S1PR3Q99500 378 aa13.57□□□□□ -0.24
PMS1-213ENST00000441310 APOHP02749 345 aaPredicted RBP13.57□□□□□ -0.24
PMS1-213ENST00000441310 ZNF747Q9BV97 191 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 SLC25A2Q9BXI2 301 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 DKK4Q9UBT3 224 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 SPTBN4Q9H254 2564 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 IGFL2Q6UWQ7 119 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 ZNF329Q86UD4 541 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 BLNKQ8WV28 456 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 SMG1Q96Q15 3661 aaKnown RBP13.56□□□□□ -0.24
PMS1-213ENST00000441310 A8MWL6 223 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 CECR9P0C854 216 aa13.56□□□□□ -0.24
PMS1-213ENST00000441310 RPP21Q9H633 154 aaKnown RBP13.56□□□□□ -0.24
PMS1-213ENST00000441310 TRGV8A0A0C4DH27 118 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 FAM90A9PA6NNJ1 464 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 C15orf61A6NNL5 157 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 PLAUP00749 431 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 NMUP48645 174 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 FAM167A-AS1Q96KT0 104 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 AP5S1Q9NUS5 200 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 PRR33A8MZF0 331 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.55□□□□□ -0.24
PMS1-213ENST00000441310 TMEM177Q53S58 311 aa13.55□□□□□ -0.24
PMS1-213ENST00000441310 K7EQM0 130 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 MGST3O14880 152 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 SMAD7O15105 426 aaKnown RBP13.54□□□□□ -0.24
PMS1-213ENST00000441310 TIMM8AO60220 97 aaPredicted RBP13.54□□□□□ -0.24
PMS1-213ENST00000441310 HSPE1P61604 102 aaKnown RBP13.54□□□□□ -0.24
PMS1-213ENST00000441310 C7orf69Q9H7B7 122 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 PLSCR4Q9NRQ2 329 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 FNDC10F2Z333 226 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 SPINT2O43291 252 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 INO80CQ6PI98 192 aaPredicted RBP13.54□□□□□ -0.24
PMS1-213ENST00000441310 SEM1Q6ZVN7 128 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 FA2HQ7L5A8 372 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 PCP2Q8IVA1 136 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 BOD1L2Q8IYS8 172 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 PAXXQ9BUH6 204 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 PTPRQQ9UMZ3 2332 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 P01737 135 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 GCSHP23434 173 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 INSIG2Q9Y5U4 225 aa13.54□□□□□ -0.24
PMS1-213ENST00000441310 ATRXP46100 2492 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 TEX50A0A1B0GTY4 177 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 K7ERJ3 54 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 MC5RP33032 325 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 WFDC2Q14508 124 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 PROCRQ9UNN8 238 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 SLC25A5P05141 298 aaKnown RBP13.53□□□□□ -0.24
PMS1-213ENST00000441310 TIMM23BQ5SRD1 257 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 OR2Z1Q8NG97 314 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 NDFIP1Q9BT67 221 aa13.53□□□□□ -0.24
PMS1-213ENST00000441310 SMIM13P0DJ93 91 aa13.52□□□□□ -0.24
PMS1-213ENST00000441310 FXYD7P58549 80 aa13.52□□□□□ -0.24
PMS1-213ENST00000441310 PRSS3P2Q8NHM4 247 aa13.52□□□□□ -0.24
PMS1-213ENST00000441310 LEAP2Q969E1 77 aa13.52□□□□□ -0.24
PMS1-213ENST00000441310 SH2D6Q7Z4S9 175 aa13.52□□□□□ -0.24
PMS1-213ENST00000441310 ABHD17AQ96GS6 310 aa13.52□□□□□ -0.24
PMS1-213ENST00000441310 ZNF48Q96MX3 618 aaPredicted RBP13.52□□□□□ -0.24
PMS1-213ENST00000441310 MOSP00540 346 aa13.52□□□□□ -0.25
PMS1-213ENST00000441310 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
PMS1-213ENST00000441310 CSN1S1P47710 185 aa13.52□□□□□ -0.25
PMS1-213ENST00000441310 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
PMS1-213ENST00000441310 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
PMS1-213ENST00000441310 CACNG7P62955 275 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 MTURNQ8N3F0 131 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 DAZAP1Q96EP5 407 aaKnown RBP13.51□□□□□ -0.25
PMS1-213ENST00000441310 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 RBPMS2Q6ZRY4 209 aaKnown RBP13.51□□□□□ -0.25
PMS1-213ENST00000441310 OR9G4Q8NGQ1 327 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 C18orf15Q96N68 181 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 J3QR89 54 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 K7EMI3 77 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 COX7A2P2O60397 106 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 IGKV3-15P01624 115 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 IGHV3-48P01763 117 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 ZNF134P52741 427 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 ATP5G2Q06055 141 aa13.51□□□□□ -0.25
PMS1-213ENST00000441310 C1orf229Q6ZS94 237 aaPredicted RBP13.51□□□□□ -0.25
PMS1-213ENST00000441310 GEMIN7Q9H840 131 aaKnown RBP13.51□□□□□ -0.25
PMS1-213ENST00000441310 ZNF71Q9NQZ8 489 aaPredicted RBP13.51□□□□□ -0.25
PMS1-213ENST00000441310 TANC2Q9HCD6 1990 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 IGHV1-18A0A0C4DH31 117 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 ETDBQ3ZM63 59 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 OR4X2Q8NGF9 303 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 VGLL1Q99990 258 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 IQCF6A8MYZ5 107 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 FXYD2P54710 66 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 SSBP2P81877 361 aaPredicted RBP13.5□□□□□ -0.25
PMS1-213ENST00000441310 LOXL1Q08397 574 aaPredicted RBP13.5□□□□□ -0.25
PMS1-213ENST00000441310 UTF1Q5T230 341 aa13.5□□□□□ -0.25
PMS1-213ENST00000441310 H3BTX0 84 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 M0R1B8 84 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 MSMPQ1L6U9 139 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 ARPC1AQ92747 370 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 SPAG8Q99932 426 aaPredicted RBP13.49□□□□□ -0.25
PMS1-213ENST00000441310 C19orf24Q9BVV8 132 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms