RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 OR51I1Q9H343 314 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 XPNPEP1Q9NQW7 623 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 PXMP4Q9Y6I8 212 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 HSPG2P98160 4391 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 RNF213Q63HN8 5207 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 CCDC171Q6TFL3 1326 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 ZNF532Q9HCE3 1301 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 DMBT1Q9UGM3 2413 aaPredicted RBP1.23□□□□□ -2.21
VPS41-207ENST00000439468 LCE6AA0A183 80 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 ZNF705FA8MVS1 300 aaPredicted RBP1.23□□□□□ -2.21
VPS41-207ENST00000439468 H3BT86 120 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 LST1O00453 97 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 PLA2G10O15496 165 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 NSA2O95478 260 aaKnown RBP1.23□□□□□ -2.21
VPS41-207ENST00000439468 TFPTP0C1Z6 253 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 RPL30P62888 115 aaKnown RBP1.23□□□□□ -2.21
VPS41-207ENST00000439468 HOXC5Q00444 222 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 DEFB109BQ30KR1 87 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 FAM78BQ5VT40 261 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 Q6ZTI0 123 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 ST6GALNAC3Q8NDV1 305 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 OR1L8Q8NGR8 309 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 OR2T4Q8NH00 348 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 LRTM1Q9HBL6 345 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 PKHD1P08F94 4074 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 FAT2Q9NYQ8 4349 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 ROS1P08922 2347 aa1.23□□□□□ -2.21
VPS41-207ENST00000439468 LRRN3E7EW58 273 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 KLRC4O43908 158 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 APOEP02649 317 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 PPBPP02775 128 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 DDTP30046 118 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 CCR7P32248 378 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 RPL28P46779 137 aaKnown RBP1.22□□□□□ -2.21
VPS41-207ENST00000439468 TCL1AP56279 114 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 TAS2R20P59543 309 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 TMEM258P61165 79 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 TNFAIP6P98066 277 aaPredicted RBP1.22□□□□□ -2.21
VPS41-207ENST00000439468 DEFB113Q30KQ7 82 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 TNFAIP8L3Q5GJ75 292 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 PABPC1L2AQ5JQF8 200 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 ZNF550Q7Z398 422 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 GID4Q8IVV7 300 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 OR5B17Q8NGF7 314 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 DIRAS2Q96HU8 199 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 PARD6GQ9BYG4 376 aaPredicted RBP1.22□□□□□ -2.21
VPS41-207ENST00000439468 USE1Q9NZ43 259 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 C3orf18Q9UK00 162 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 GINS2Q9Y248 185 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 PRELID1Q9Y255 219 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 DNAH10Q8IVF4 4471 aa1.22□□□□□ -2.21
VPS41-207ENST00000439468 DOCK10Q96BY6 2186 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 OR4C45A6NMZ5 311 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 C10orf142B7Z368 130 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 PIN1P1O15428 100 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 LGALS1P09382 135 aaKnown RBP1.21□□□□□ -2.22
VPS41-207ENST00000439468 UCHL1P09936 223 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 IDH3GP51553 393 aaPredicted RBP1.21□□□□□ -2.22
VPS41-207ENST00000439468 AQP4P55087 323 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 TPI1P60174 286 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 NAA20P61599 178 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 MIAQ16674 131 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 TMEM155Q4W5P6 130 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 COQ5Q5HYK3 327 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 CLVS2Q5SYC1 327 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 OGFRL1Q5TC84 451 aaPredicted RBP1.21□□□□□ -2.22
VPS41-207ENST00000439468 SFXN4Q6P4A7 337 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 CD200R1LQ6Q8B3 271 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 C5orf46Q6UWT4 87 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 SSX8Q7RTT4 187 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 IQCF2Q8IXL9 164 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 SLC22A24Q8N4F4 322 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 GPR32P1Q8NGA4 272 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 OR4C6Q8NH72 309 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 JOSD2Q8TAC2 188 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 LHFPL5Q8TAF8 219 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 ASB17Q8WXJ9 295 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 KLK6Q92876 244 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 VCX3BQ9H321 246 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 GPR84Q9NQS5 396 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 NAT8Q9UHE5 227 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 HEATR5AQ86XA9 2040 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 FREM1Q5H8C1 2179 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 MALRD1Q5VYJ5 2156 aa1.21□□□□□ -2.22
VPS41-207ENST00000439468 MYCBP2O75592 4640 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 HMCN2Q8NDA2 5059 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 EML6Q6ZMW3 1958 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 ALMS1Q8TCU4 4167 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 SIGLEC16A6NMB1 481 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 INMT-MINDY4F8WBC2 141 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 I3L521 148 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 SLC16A4O15374 487 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 TGOLN2O43493 480 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 AP2S1P53680 142 aaPredicted RBP1.2□□□□□ -2.22
VPS41-207ENST00000439468 FXYD7P58549 80 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 RAB14P61106 215 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 TFF3Q07654 80 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 ZNF705AQ6ZN79 300 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms