RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NBR2O15453 112 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 ERCC8Q13216 396 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 SPINK2P20155 84 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 RBM3P98179 157 aaKnown RBP9.61□□□□□ -0.87
PTCH1-209ENST00000437951 HAPLN4Q86UW8 402 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 LY6G5BQ8NDX9 201 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 FOXL2P58012 376 aa9.61□□□□□ -0.87
PTCH1-209ENST00000437951 DSCR8Q96T75 97 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 SUMO4Q6EEV6 95 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-209ENST00000437951 WDR81Q562E7 1941 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 SPAARA0A1B0GVQ0 90 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 IGKV1D-33P01593 117 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 IGKV1-33P01594 117 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 TRGV9Q99603 122 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 C1orf122Q6ZSJ8 110 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 LEAP2Q969E1 77 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 TRGV4A0A0C4DH28 118 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 H3BQ85 93 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 Q6ZT83 130 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-209ENST00000437951 EML6Q6ZMW3 1958 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 TANC2Q9HCD6 1990 aa9.6□□□□□ -0.87
PTCH1-209ENST00000437951 EREGO14944 169 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 NABP1Q96AH0 204 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 MED13LQ71F56 2210 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 LYL1P12980 280 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 LILRA6Q6PI73 481 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 SNHG12Q9BXW3 62 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 WNK1Q9H4A3 2382 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 ZNF831Q5JPB2 1677 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 CTHRC1Q96CG8 243 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 IGHV3-48P01763 117 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 HELZP42694 1942 aaKnown RBP9.59□□□□□ -0.87
PTCH1-209ENST00000437951 PROB1E7EW31 1015 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 ZNF114Q8NC26 417 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 CELA2BP08218 269 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-209ENST00000437951 CLEC19AQ6UXS0 136 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 SPATA25Q9BR10 227 aa9.59□□□□□ -0.87
PTCH1-209ENST00000437951 COX8AP10176 69 aa9.59□□□□□ -0.88
PTCH1-209ENST00000437951 TMEM256Q8N2U0 113 aa9.59□□□□□ -0.88
PTCH1-209ENST00000437951 ZNF501Q96CX3 271 aaPredicted RBP9.59□□□□□ -0.88
PTCH1-209ENST00000437951 APOBEC3AP31941 199 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-209ENST00000437951 NBASA2RRP1 2371 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 FRMPD3Q5JV73 1810 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 IGHV3-64A0A075B6Q5 118 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 EFEMP2O95967 443 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 CD33P20138 364 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 LY6EQ16553 131 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 ZC2HC1BQ5TFG8 222 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 TMEM52Q8NDY8 209 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 FBXL15Q9H469 300 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 WFDC1Q9HC57 220 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 RPL36AP83881 106 aaKnown RBP9.58□□□□□ -0.88
PTCH1-209ENST00000437951 RPL36ALQ969Q0 106 aaKnown RBP9.58□□□□□ -0.88
PTCH1-209ENST00000437951 CHCHD5Q9BSY4 110 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 NCR2O95944 276 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 IL9P15248 144 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-209ENST00000437951 SMIM20Q8N5G0 67 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 NAA38Q9BRA0 125 aaKnown RBP9.58□□□□□ -0.88
PTCH1-209ENST00000437951 TMEM158Q8WZ71 300 aa9.58□□□□□ -0.88
PTCH1-209ENST00000437951 TRAV13-2A0A0B4J235 113 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 CEND1Q8N111 149 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 SAA2-SAA4A0A096LPE2 208 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 SAA2P0DJI9 122 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-209ENST00000437951 RAMP3O60896 148 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 NPC2P61916 151 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 REPIN1Q9BWE0 567 aaKnown RBP9.57□□□□□ -0.88
PTCH1-209ENST00000437951 INS-IGF2F8WCM5 200 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 INSP01308 110 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 IGLV3-21P80748 117 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-209ENST00000437951 PDE6HQ13956 83 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 CYTL1Q9NRR1 136 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 PRR19A6NJB7 356 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 LILRA1O75019 489 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 SS18Q15532 418 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 TREML4Q6UXN2 200 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 ATOX1O00244 68 aa9.57□□□□□ -0.88
PTCH1-209ENST00000437951 ZNF138P52744 262 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 LYZL1Q6UWQ5 148 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 IGKV1-8A0A0C4DH67 115 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 IGHV2-26A0A0B4J1V2 119 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 RIF1Q5UIP0 2472 aaKnown RBP9.56□□□□□ -0.88
PTCH1-209ENST00000437951 TMEM92Q6UXU6 159 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 AMN1Q8IY45 258 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 MRPS18CQ9Y3D5 142 aaKnown RBP9.56□□□□□ -0.88
PTCH1-209ENST00000437951 IGHV3-66A0A0C4DH42 116 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 HTN3P15516 51 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 MORN2Q502X0 79 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 SLC25A28Q96A46 364 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 MUC4Q99102 2169 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 H0YIZ8 118 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 IGHG3P01860 377 aa9.56□□□□□ -0.88
PTCH1-209ENST00000437951 PYYP10082 97 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms