RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 NKX2-1P43699 371 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-208ENST00000417285 ID3Q02535 119 aa18.36■□□□□ 0.53
VEGFA-208ENST00000417285 CNPY1Q3B7I2 92 aa18.36■□□□□ 0.53
VEGFA-208ENST00000417285 ANXA7P20073 488 aaKnown RBP18.35■□□□□ 0.53
VEGFA-208ENST00000417285 ID1P41134 155 aa18.35■□□□□ 0.53
VEGFA-208ENST00000417285 CLEC5AQ9NY25 188 aa18.35■□□□□ 0.53
VEGFA-208ENST00000417285 POLR2GP62487 172 aaKnown RBP eCLIP18.34■□□□□ 0.53
VEGFA-208ENST00000417285 AKR1C1Q04828 323 aa18.34■□□□□ 0.53
VEGFA-208ENST00000417285 OR4D5Q8NGN0 318 aa18.34■□□□□ 0.53
VEGFA-208ENST00000417285 OR8I2Q8N0Y5 310 aa18.33■□□□□ 0.52
VEGFA-208ENST00000417285 RPP25LQ8N5L8 163 aaKnown RBP18.33■□□□□ 0.52
VEGFA-208ENST00000417285 BPIFCQ8NFQ6 507 aa18.33■□□□□ 0.52
VEGFA-208ENST00000417285 PSENENQ9NZ42 101 aa18.33■□□□□ 0.52
VEGFA-208ENST00000417285 SLC45A2Q9UMX9 530 aa18.33■□□□□ 0.52
VEGFA-208ENST00000417285 HLA-DRB4P13762 266 aa18.32■□□□□ 0.52
VEGFA-208ENST00000417285 HLA-DMBP28068 263 aa18.32■□□□□ 0.52
VEGFA-208ENST00000417285 PSMB3P49720 205 aa18.32■□□□□ 0.52
VEGFA-208ENST00000417285 ACOT7LQ6ZUV0 252 aa18.32■□□□□ 0.52
VEGFA-208ENST00000417285 HLA-DRB4X5D2U9 266 aa18.32■□□□□ 0.52
VEGFA-208ENST00000417285 IGLL5B9A064 214 aa18.31■□□□□ 0.52
VEGFA-208ENST00000417285 SSSCA1O60232 199 aa18.31■□□□□ 0.52
VEGFA-208ENST00000417285 S100A7P31151 101 aa18.31■□□□□ 0.52
VEGFA-208ENST00000417285 SAMD13Q5VXD3 122 aa18.31■□□□□ 0.52
VEGFA-208ENST00000417285 WDR12Q9GZL7 423 aaKnown RBP18.31■□□□□ 0.52
VEGFA-208ENST00000417285 XCL2Q9UBD3 114 aa18.31■□□□□ 0.52
VEGFA-208ENST00000417285 ELOA3CA0A087WX78 387 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-208ENST00000417285 TRAV10A0A0B4J240 114 aa18.3■□□□□ 0.52
VEGFA-208ENST00000417285 SPATA31B1PQ5VZV4 182 aa18.3■□□□□ 0.52
VEGFA-208ENST00000417285 TMEM144Q7Z5S9 345 aa18.3■□□□□ 0.52
VEGFA-208ENST00000417285 SMIM8Q96KF7 97 aa18.3■□□□□ 0.52
VEGFA-208ENST00000417285 LINC00052Q96N35 136 aa18.3■□□□□ 0.52
VEGFA-208ENST00000417285 APLNQ9ULZ1 77 aa18.3■□□□□ 0.52
VEGFA-208ENST00000417285 SMCO3A2RU48 225 aa18.29■□□□□ 0.52
VEGFA-208ENST00000417285 IAH1Q2TAA2 248 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-208ENST00000417285 MITD1Q8WV92 249 aa18.29■□□□□ 0.52
VEGFA-208ENST00000417285 CLUHP3Q96NS8 147 aa18.29■□□□□ 0.52
VEGFA-208ENST00000417285 C20orf85Q9H1P6 137 aa18.29■□□□□ 0.52
VEGFA-208ENST00000417285 SOCS3O14543 225 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 LYRM1O43325 122 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 DEDDO75618 318 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 SCGB1D2O95969 90 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 ORM2P19652 201 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 GALR1P47211 349 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 MEOX2P50222 304 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 FOXI2Q6ZQN5 318 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 TMEM147Q9BVK8 224 aa18.28■□□□□ 0.52
VEGFA-208ENST00000417285 SAV1Q9H4B6 383 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-208ENST00000417285 ZNF98A6NK75 572 aa18.27■□□□□ 0.52
VEGFA-208ENST00000417285 ISLRO14498 428 aa18.27■□□□□ 0.52
VEGFA-208ENST00000417285 PLA2G10O15496 165 aa18.27■□□□□ 0.52
VEGFA-208ENST00000417285 GATA2P23769 480 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-208ENST00000417285 NEU1Q99519 415 aa18.27■□□□□ 0.52
VEGFA-208ENST00000417285 SLC25A22Q9H936 323 aa18.27■□□□□ 0.52
VEGFA-208ENST00000417285 SMIM9A6NGZ8 99 aa18.26■□□□□ 0.51
VEGFA-208ENST00000417285 CYP2G1PQ6ZSU1 146 aa18.26■□□□□ 0.51
VEGFA-208ENST00000417285 Q6ZTC4 211 aa18.26■□□□□ 0.51
VEGFA-208ENST00000417285 ZBTB8BQ8NAP8 495 aaPredicted RBP18.26■□□□□ 0.51
VEGFA-208ENST00000417285 OR1B1Q8NGR6 318 aa18.26■□□□□ 0.51
VEGFA-208ENST00000417285 GPR82Q96P67 336 aa18.26■□□□□ 0.51
VEGFA-208ENST00000417285 SLC25A32Q9H2D1 315 aa18.26■□□□□ 0.51
VEGFA-208ENST00000417285 GSKIPQ9P0R6 139 aa18.26■□□□□ 0.51
VEGFA-208ENST00000417285 PMS2P5A8MQ11 134 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 IL5P05113 134 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 PAX9P55771 341 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 TAS2R30P59541 319 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 GDF5OSQ5U4N7 250 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 TMEM14EPQ6UXP3 125 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 TMEM182Q6ZP80 229 aaPredicted RBP18.25■□□□□ 0.51
VEGFA-208ENST00000417285 C16orf92Q96LL3 132 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 KMT2AQ03164 3969 aa18.25■□□□□ 0.51
VEGFA-208ENST00000417285 METTL15P1P0C7V9 234 aa18.24■□□□□ 0.51
VEGFA-208ENST00000417285 DLK1P80370 383 aa18.24■□□□□ 0.51
VEGFA-208ENST00000417285 EBLN2Q6P2I7 272 aa18.24■□□□□ 0.51
VEGFA-208ENST00000417285 ZNF705AQ6ZN79 300 aaPredicted RBP18.24■□□□□ 0.51
VEGFA-208ENST00000417285 RNF126Q9BV68 326 aa18.24■□□□□ 0.51
VEGFA-208ENST00000417285 TMEM189A5PLL7 270 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 FNDC10F2Z333 226 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 TSC22D2O75157 780 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 IGKV3-20P01619 116 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 TCRBP04435 133 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 DEFB1P60022 68 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 RRAS2P62070 204 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-208ENST00000417285 SELENOTP62341 195 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 OR10P1Q8NGE3 313 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 RSG1Q9BU20 258 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 CCDC32Q9BV29 185 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 NPVFQ9HCQ7 196 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 RPRMQ9NS64 109 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 MGAT4CQ9UBM8 478 aa18.23■□□□□ 0.51
VEGFA-208ENST00000417285 VPS13DQ5THJ4 4388 aa18.22■□□□□ 0.51
VEGFA-208ENST00000417285 ZNF705FA8MVS1 300 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-208ENST00000417285 ZNF705DP0CH99 300 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-208ENST00000417285 ZNF705BP0CI00 300 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-208ENST00000417285 RAP2BP61225 183 aa18.22■□□□□ 0.51
VEGFA-208ENST00000417285 ZNF846Q147U1 533 aa18.22■□□□□ 0.51
VEGFA-208ENST00000417285 C12orf74Q32Q52 190 aa18.22■□□□□ 0.51
VEGFA-208ENST00000417285 OR4B1Q8NGF8 309 aa18.22■□□□□ 0.51
VEGFA-208ENST00000417285 RCL1Q9Y2P8 373 aaKnown RBP18.22■□□□□ 0.51
VEGFA-208ENST00000417285 TRAV6A0A075B6T7 132 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 CCNKO75909 580 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms