RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OR2F1Q13607 317 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 FAM222AQ5U5X8 452 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 C1orf158Q8N1D5 194 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 OR1S1Q8NH92 325 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 FAM210BQ96KR6 192 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 NIPSNAP3BQ9BS92 247 aa10.55□□□□□ -0.72
RPS28-201ENST00000417088 PKD1P98161 4303 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 ISLRO14498 428 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 PITX3O75364 302 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 IFNA21P01568 189 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 FABP1P07148 127 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 ANXA3P12429 323 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 PAX9P55771 341 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 SRPXP78539 464 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 PSG9Q00887 426 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 OR8I2Q8N0Y5 310 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 DYNC2LI1Q8TCX1 351 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 TRGV9Q99603 122 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 MRPS26Q9BYN8 205 aaKnown RBP10.54□□□□□ -0.72
RPS28-201ENST00000417088 MCUBQ9NWR8 336 aa10.54□□□□□ -0.72
RPS28-201ENST00000417088 CCDC59Q9P031 241 aaKnown RBP10.54□□□□□ -0.72
RPS28-201ENST00000417088 RSL24D1Q9UHA3 163 aaKnown RBP10.54□□□□□ -0.72
RPS28-201ENST00000417088 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 A0A0J9YX75 114 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 MED14OSP0DP75 135 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 IAPPP10997 89 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 EBLN2Q6P2I7 272 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 Q6ZR54 194 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 THAP8Q8NA92 274 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 PPP1R14BQ96C90 147 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 GOLT1BQ9Y3E0 138 aa10.53□□□□□ -0.72
RPS28-201ENST00000417088 IGLV2-18A0A075B6J9 118 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 LOC102723971A0A1B0GUV8 181 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 HBE1P02100 147 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 RAB11AP62491 216 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 OXA1LQ15070 435 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 UBE2DNLQ8IWF7 75 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 C20orf173Q96LM9 149 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 C17orf77Q96MU5 243 aa10.52□□□□□ -0.73
RPS28-201ENST00000417088 C7orf50Q9BRJ6 194 aaKnown RBP10.52□□□□□ -0.73
RPS28-201ENST00000417088 YTHDF2Q9Y5A9 579 aaKnown RBP10.52□□□□□ -0.73
RPS28-201ENST00000417088 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 A8MTW9 85 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 HTN3P15516 51 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 RRN3P1Q2M238 152 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 SAMD13Q5VXD3 122 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 RAB2BQ8WUD1 216 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 C16orf92Q96LL3 132 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 RPRMQ9NS64 109 aa10.51□□□□□ -0.73
RPS28-201ENST00000417088 PAIP2BQ9ULR5 123 aaKnown RBP10.51□□□□□ -0.73
RPS28-201ENST00000417088 ABCA13Q86UQ4 5058 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 SLC25A6P12236 298 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 TNFSF8P32971 234 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 MEOX2P50222 304 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 RNF212Q495C1 297 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 GGNBP1Q5YKI7 109 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 AMTNQ6UX39 209 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 TMED4Q7Z7H5 227 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 SLIRPQ9GZT3 109 aaKnown RBP10.5□□□□□ -0.73
RPS28-201ENST00000417088 SLC25A32Q9H2D1 315 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 DOK5Q9P104 306 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 MUC4Q99102 2169 aa10.5□□□□□ -0.73
RPS28-201ENST00000417088 PIGBOS1A0A0B4J2F0 54 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 FABP12A6NFH5 140 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 ZNF98A6NK75 572 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 CFDP00746 253 aaPredicted RBP10.49□□□□□ -0.73
RPS28-201ENST00000417088 GALR1P47211 349 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 TMBIM6P55061 237 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 TMEM128Q5BJH2 165 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 IGF2BP2-AS1Q96M15 143 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 BCL7BQ9BQE9 202 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 MAGT1Q9H0U3 335 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 SLC25A22Q9H936 323 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 SLC45A2Q9UMX9 530 aa10.49□□□□□ -0.73
RPS28-201ENST00000417088 MED6O75586 246 aa10.48□□□□□ -0.73
RPS28-201ENST00000417088 GATA2P23769 480 aaPredicted RBP10.48□□□□□ -0.73
RPS28-201ENST00000417088 DAD1P61803 113 aa10.48□□□□□ -0.73
RPS28-201ENST00000417088 TMEM88Q6PEY1 159 aa10.48□□□□□ -0.73
RPS28-201ENST00000417088 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
RPS28-201ENST00000417088 TMEM182Q6ZP80 229 aaPredicted RBP10.48□□□□□ -0.73
RPS28-201ENST00000417088 CIB3Q96Q77 187 aaPredicted RBP10.48□□□□□ -0.73
RPS28-201ENST00000417088 NACAE9PAV3 2078 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 WRBO00258 174 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 SYNGR2O43760 224 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 ORM2P19652 201 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 VAMP1P23763 118 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 FAUP35544 74 aaKnown RBP10.47□□□□□ -0.73
RPS28-201ENST00000417088 BPIFCQ8NFQ6 507 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 OR4D5Q8NGN0 318 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 OR1B1Q8NGR6 318 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 TRIM63Q969Q1 353 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 TMEM208Q9BTX3 173 aa10.47□□□□□ -0.73
RPS28-201ENST00000417088 TRAV8-2A0A0B4J237 113 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms