RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 SMCO1Q147U7 214 aa17.31■□□□□ 0.36
AC005540.1-201ENST00000413911 A0A0B4J2A0 478 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 GPX4P36969 197 aaPredicted RBP17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 LYZP61626 148 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 OR2F1Q13607 317 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 C20orf173Q96LM9 149 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 C17orf77Q96MU5 243 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 NIPSNAP3BQ9BS92 247 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 CACFD1Q9UGQ2 172 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 SHPKQ9UHJ6 478 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 KCNIP3Q9Y2W7 256 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 MUC4Q99102 2169 aa17.3■□□□□ 0.36
AC005540.1-201ENST00000413911 TNFSF8P32971 234 aa17.29■□□□□ 0.36
AC005540.1-201ENST00000413911 NUP62P37198 522 aaPredicted RBP17.29■□□□□ 0.36
AC005540.1-201ENST00000413911 ID1P41134 155 aa17.29■□□□□ 0.36
AC005540.1-201ENST00000413911 C1orf194Q5T5A4 169 aa17.29■□□□□ 0.36
AC005540.1-201ENST00000413911 FAM78BQ5VT40 261 aa17.29■□□□□ 0.36
AC005540.1-201ENST00000413911 MCFD2Q8NI22 146 aa17.29■□□□□ 0.36
AC005540.1-201ENST00000413911 RSL24D1Q9UHA3 163 aaKnown RBP17.29■□□□□ 0.36
AC005540.1-201ENST00000413911 IGKV1OR2-108A0A075B7D4 117 aa17.28■□□□□ 0.36
AC005540.1-201ENST00000413911 AKR1C4P17516 323 aa17.28■□□□□ 0.36
AC005540.1-201ENST00000413911 PAX9P55771 341 aa17.28■□□□□ 0.36
AC005540.1-201ENST00000413911 PSG9Q00887 426 aa17.28■□□□□ 0.36
AC005540.1-201ENST00000413911 COQ8AQ8NI60 647 aa17.28■□□□□ 0.36
AC005540.1-201ENST00000413911 FAM210BQ96KR6 192 aa17.28■□□□□ 0.36
AC005540.1-201ENST00000413911 A0A0J9YX75 114 aa17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 IFNA21P01568 189 aa17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 HTN3P15516 51 aa17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 UBE2DNLQ8IWF7 75 aa17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 SLC35E1Q96K37 410 aa17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 MCUBQ9NWR8 336 aa17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 SCP2D1Q9UJQ7 156 aa17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 YTHDF2Q9Y5A9 579 aaKnown RBP17.27■□□□□ 0.36
AC005540.1-201ENST00000413911 NACAE9PAV3 2078 aa17.26■□□□□ 0.35
AC005540.1-201ENST00000413911 PFDN2Q9UHV9 154 aa17.26■□□□□ 0.35
AC005540.1-201ENST00000413911 HSPG2P98160 4391 aa17.26■□□□□ 0.35
AC005540.1-201ENST00000413911 LOC102723971A0A1B0GUV8 181 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 CCDC160A6NGH7 325 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 SNRPGP15A8MWD9 76 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 ISLRO14498 428 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 PITX3O75364 302 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 ATP5IP56385 69 aaPredicted RBP17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 OXA1LQ15070 435 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 ZNF575Q86XF7 245 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 OR8I2Q8N0Y5 310 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 OR1S1Q8NH92 325 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 TRGV9Q99603 122 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 KRTAP4-5Q9BYR2 181 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 GOLT1BQ9Y3E0 138 aa17.25■□□□□ 0.35
AC005540.1-201ENST00000413911 PRM2P04554 102 aa17.24■□□□□ 0.35
AC005540.1-201ENST00000413911 IAPPP10997 89 aa17.24■□□□□ 0.35
AC005540.1-201ENST00000413911 SPATA31B1PQ5VZV4 182 aa17.24■□□□□ 0.35
AC005540.1-201ENST00000413911 TMEM88Q6PEY1 159 aa17.24■□□□□ 0.35
AC005540.1-201ENST00000413911 AMTNQ6UX39 209 aa17.24■□□□□ 0.35
AC005540.1-201ENST00000413911 TEX48A0A1B0GUV7 120 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 FABP12A6NFH5 140 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 A8MTW9 85 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 HBE1P02100 147 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 RNF212Q495C1 297 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 EBLN2Q6P2I7 272 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 THAP8Q8NA92 274 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 PPP1R14BQ96C90 147 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 SCGB3A2Q96PL1 93 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 C7orf50Q9BRJ6 194 aaKnown RBP17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 SLC25A32Q9H2D1 315 aa17.23■□□□□ 0.35
AC005540.1-201ENST00000413911 TMEM182Q6ZP80 229 aaPredicted RBP17.22■□□□□ 0.35
AC005540.1-201ENST00000413911 V9GYH0 126 aa17.22■□□□□ 0.35
AC005540.1-201ENST00000413911 RRN3P1Q2M238 152 aa17.21■□□□□ 0.35
AC005540.1-201ENST00000413911 C16orf92Q96LL3 132 aa17.21■□□□□ 0.35
AC005540.1-201ENST00000413911 RPRMQ9NS64 109 aa17.21■□□□□ 0.35
AC005540.1-201ENST00000413911 DOK5Q9P104 306 aa17.21■□□□□ 0.35
AC005540.1-201ENST00000413911 LRP1BQ9NZR2 4599 aa17.21■□□□□ 0.35
AC005540.1-201ENST00000413911 PRSS46E5RG02 174 aa17.2■□□□□ 0.34
AC005540.1-201ENST00000413911 FABP1P07148 127 aa17.2■□□□□ 0.34
AC005540.1-201ENST00000413911 GATA2P23769 480 aaPredicted RBP17.2■□□□□ 0.34
AC005540.1-201ENST00000413911 CCDC190Q86UF4 302 aa17.2■□□□□ 0.34
AC005540.1-201ENST00000413911 RSG1Q9BU20 258 aa17.2■□□□□ 0.34
AC005540.1-201ENST00000413911 SLC25A22Q9H936 323 aa17.2■□□□□ 0.34
AC005540.1-201ENST00000413911 ZNF98A6NK75 572 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 DAD1P61803 113 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 SRPXP78539 464 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 IGFL4Q6B9Z1 124 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 TRIM63Q969Q1 353 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 IGF2BP2-AS1Q96M15 143 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 MAGT1Q9H0U3 335 aa17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 PAIP2BQ9ULR5 123 aaKnown RBP17.19■□□□□ 0.34
AC005540.1-201ENST00000413911 CRXO43186 299 aaPredicted RBP17.18■□□□□ 0.34
AC005540.1-201ENST00000413911 ANXA3P12429 323 aa17.18■□□□□ 0.34
AC005540.1-201ENST00000413911 RAB11AP62491 216 aa17.18■□□□□ 0.34
AC005540.1-201ENST00000413911 TMED4Q7Z7H5 227 aa17.18■□□□□ 0.34
AC005540.1-201ENST00000413911 TRAV8-2A0A0B4J237 113 aa17.17■□□□□ 0.34
AC005540.1-201ENST00000413911 ZNF705GA8MUZ8 300 aaPredicted RBP17.17■□□□□ 0.34
AC005540.1-201ENST00000413911 GALR1P47211 349 aa17.17■□□□□ 0.34
AC005540.1-201ENST00000413911 MEOX2P50222 304 aa17.17■□□□□ 0.34
AC005540.1-201ENST00000413911 C1orf134Q5TEV5 83 aa17.17■□□□□ 0.34
AC005540.1-201ENST00000413911 M0R2Z0 102 aa17.16■□□□□ 0.34
AC005540.1-201ENST00000413911 CNN1P51911 297 aaKnown RBP17.16■□□□□ 0.34
AC005540.1-201ENST00000413911 OR11H7Q8NGC8 314 aa17.16■□□□□ 0.34
AC005540.1-201ENST00000413911 DUXBA0A1W2PPF3 345 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms