RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 A0A1B0GUS0 222 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 SCO2A0A1W2PP80 73 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 NDUFB4O95168 129 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 FAM106CPP0CH98 169 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 PAX8Q06710 450 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 C19orf35Q6ZS72 473 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 STXBP6Q8NFX7 210 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 OR51G1Q8NGK1 321 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 FAM110DQ8TAY7 271 aaPredicted RBP13.41□□□□□ -0.26
PTPRC-206ENST00000413409 Q8WTZ3 238 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 ANAPC16Q96DE5 110 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 WNT10AQ9GZT5 417 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 LY96Q9Y6Y9 160 aa13.41□□□□□ -0.26
PTPRC-206ENST00000413409 C9JCJ5 164 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 NPFFO15130 113 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 TGOLN2O43493 480 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 FABP1P07148 127 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 APELAP0DMC3 54 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 SAA4P35542 130 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 UBE2L3P68036 154 aaKnown RBP13.4□□□□□ -0.26
PTPRC-206ENST00000413409 PATE2Q6UY27 113 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 LINC01551Q86U37 167 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 OR5AU1Q8NGC0 362 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 ZNF355PQ9NSJ1 428 aa13.4□□□□□ -0.26
PTPRC-206ENST00000413409 TRBV24-1A0A075B6N3 115 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 FAM181BA6NEQ2 426 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 H7BYZ3 331 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 K7EIM0 57 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 IGHV3-48P01763 117 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 HLA-DRB1P01911 266 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 IGLC1P0CG04 106 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 KIAA0141Q14154 515 aaPredicted RBP13.39□□□□□ -0.27
PTPRC-206ENST00000413409 KPRPQ5T749 579 aaPredicted RBP13.39□□□□□ -0.27
PTPRC-206ENST00000413409 C16orf82Q7Z2V1 217 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 TCEAL7Q9BRU2 100 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 BIN3Q9NQY0 253 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 HYPMO75409 117 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 CD24P25063 80 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 CX3CL1P78423 397 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 ZNF343Q6P1L6 599 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 TTC9CQ8N5M4 171 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 PAXXQ9BUH6 204 aa13.39□□□□□ -0.27
PTPRC-206ENST00000413409 RYR2Q92736 4967 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 IGLV11-55A0A075B6I3 123 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 MDFIC2A0A1B0GVS7 189 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 NCBP2LA6PVI3 153 aaKnown RBP13.38□□□□□ -0.27
PTPRC-206ENST00000413409 NDPQ00604 133 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 ASPHD1Q5U4P2 390 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 MORN5Q5VZ52 161 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 RUSC1-AS1Q66K80 236 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 Q8N9W7 124 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 DERL1Q9BUN8 251 aa13.38□□□□□ -0.27
PTPRC-206ENST00000413409 IGHV3OR16-10A0A075B7F0 116 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 CENPVL3A0A0U1RRI6 287 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 GGTLC3B5MD39 225 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 PLXNB1O43157 2135 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 CXCL1P09341 107 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 S100PP25815 95 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 KLK9Q2XQG4 91 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 LINC00305Q7Z4B0 112 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 SSX3Q99909 188 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 PYGO2Q9BRQ0 406 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 KRTAP17-1Q9BYP8 105 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 OR51M1Q9H341 326 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 KLK9Q9UKQ9 250 aa13.37□□□□□ -0.27
PTPRC-206ENST00000413409 TRBV20OR9-2A0A075B6H5 130 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 TGIF2-C20orf24A0A0A6YYL0 155 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 IGHV7-81A0A0B4J1V7 117 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 TRAV5A0A0B4J249 113 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 IGHV1-69DA0A0B4J2H0 117 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 HOXA3O43365 443 aaPredicted RBP13.36□□□□□ -0.27
PTPRC-206ENST00000413409 IGHV1-69P01742 117 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
PTPRC-206ENST00000413409 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 OR1B1Q8NGR6 318 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 C2CD4CQ8TF44 421 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 FXYD5Q96DB9 178 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 FAM210BQ96KR6 192 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 RBM14Q96PK6 669 aaKnown RBP13.36□□□□□ -0.27
PTPRC-206ENST00000413409 RASL11BQ9BPW5 248 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 URGCP-MRPS24S4R325 110 aa13.36□□□□□ -0.27
PTPRC-206ENST00000413409 TRAV30A0A087WSZ9 112 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 IGHV3-21A0A0B4J1V1 117 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 NDUFA7O95182 113 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 IGKV1-17P01599 117 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 OR10J4P0C629 311 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 RPS10P46783 165 aaKnown RBP13.35□□□□□ -0.27
PTPRC-206ENST00000413409 GALR1P47211 349 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 SAMD5Q5TGI4 173 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 C9orf139Q6ZV77 190 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 ZFP82Q8N141 532 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 FANCD2OSQ96PS1 177 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 IMMP2LQ96T52 175 aa13.35□□□□□ -0.27
PTPRC-206ENST00000413409 FAM103A1Q9BTL3 118 aaKnown RBP13.35□□□□□ -0.27
PTPRC-206ENST00000413409 HIGD1AQ9Y241 93 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms