RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 TMEM182Q6ZP80 229 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-204ENST00000413232 FOXI2Q6ZQN5 318 aa13.72□□□□□ -0.21
CPSF7-204ENST00000413232 THAP8Q8NA92 274 aa13.72□□□□□ -0.21
CPSF7-204ENST00000413232 OR4B1Q8NGF8 309 aa13.72□□□□□ -0.21
CPSF7-204ENST00000413232 C20orf173Q96LM9 149 aa13.72□□□□□ -0.21
CPSF7-204ENST00000413232 NACAE9PAV3 2078 aa13.71□□□□□ -0.21
CPSF7-204ENST00000413232 NUP62P37198 522 aaPredicted RBP13.71□□□□□ -0.21
CPSF7-204ENST00000413232 C1orf158Q8N1D5 194 aa13.71□□□□□ -0.21
CPSF7-204ENST00000413232 LRTM2Q8N967 370 aa13.71□□□□□ -0.21
CPSF7-204ENST00000413232 CLUHP3Q96NS8 147 aa13.71□□□□□ -0.21
CPSF7-204ENST00000413232 MAGT1Q9H0U3 335 aa13.71□□□□□ -0.21
CPSF7-204ENST00000413232 PAIP2BQ9ULR5 123 aaKnown RBP13.71□□□□□ -0.21
CPSF7-204ENST00000413232 V9GYH0 126 aa13.71□□□□□ -0.21
CPSF7-204ENST00000413232 DUXBA0A1W2PPF3 345 aa13.7□□□□□ -0.22
CPSF7-204ENST00000413232 GATA2P23769 480 aaPredicted RBP13.7□□□□□ -0.22
CPSF7-204ENST00000413232 ID1P41134 155 aa13.7□□□□□ -0.22
CPSF7-204ENST00000413232 OR8I2Q8N0Y5 310 aa13.7□□□□□ -0.22
CPSF7-204ENST00000413232 POM121L12Q8N7R1 296 aa13.7□□□□□ -0.22
CPSF7-204ENST00000413232 SPART-AS1P0CW21 52 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 VAMP1P23763 118 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 PAX9P55771 341 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 RAB11AP62491 216 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 PPP1R1AQ13522 171 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 PYDC2Q56P42 97 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 COQ8AQ8NI60 647 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 PPP1R14BQ96C90 147 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 NDUFAF3Q9BU61 184 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 SLC25A32Q9H2D1 315 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 PFDN2Q9UHV9 154 aa13.69□□□□□ -0.22
CPSF7-204ENST00000413232 A0A0J9YX75 114 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 A0A1B0GVY2 172 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 SMIM9A6NGZ8 99 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 M0R2N4 97 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 WRBO00258 174 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 ISLRO14498 428 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 SFT2D2O95562 160 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 SLC25A6P12236 298 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 FAM222AQ5U5X8 452 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 TOMM5Q8N4H5 51 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 MUC4Q99102 2169 aa13.68□□□□□ -0.22
CPSF7-204ENST00000413232 ZNF98A6NK75 572 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 SYNGR2O43760 224 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 FABP1P07148 127 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 HOXB5P09067 269 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 P0DMU3 169 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 FAM231AP0DMU4 169 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 FAM231CP0DMU5 169 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 FAUP35544 74 aaKnown RBP13.67□□□□□ -0.22
CPSF7-204ENST00000413232 PSG9Q00887 426 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 RFNGQ9Y644 331 aa13.67□□□□□ -0.22
CPSF7-204ENST00000413232 TMEM189A5PLL7 270 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 RTL8CO15255 209 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 PRM2P04554 102 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 IGFL4Q6B9Z1 124 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 AMTNQ6UX39 209 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 RSG1Q9BU20 258 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 TMED3Q9Y3Q3 217 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 PKD1P98161 4303 aa13.66□□□□□ -0.22
CPSF7-204ENST00000413232 A8MTW9 85 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 H3BP45 60 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 MED6O75586 246 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 GGNBP1Q5YKI7 109 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 EBLN2Q6P2I7 272 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 LINC00336Q6ZUF6 198 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 SLC25A21Q9BQT8 299 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-204ENST00000413232 NIPSNAP3BQ9BS92 247 aa13.65□□□□□ -0.22
CPSF7-204ENST00000413232 NOL3O60936 208 aaKnown RBP13.64□□□□□ -0.23
CPSF7-204ENST00000413232 ORM2P19652 201 aa13.64□□□□□ -0.23
CPSF7-204ENST00000413232 AP3S2P59780 193 aa13.64□□□□□ -0.23
CPSF7-204ENST00000413232 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-204ENST00000413232 RPRMQ9NS64 109 aa13.64□□□□□ -0.23
CPSF7-204ENST00000413232 YTHDF2Q9Y5A9 579 aaKnown RBP13.64□□□□□ -0.23
CPSF7-204ENST00000413232 TRAV8-2A0A0B4J237 113 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 PIGBOS1A0A0B4J2F0 54 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 LOC102723971A0A1B0GUV8 181 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 ADAP1O75689 374 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 GALR1P47211 349 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 ACOT7LQ6ZUV0 252 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 DOK5Q9P104 306 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 GOLT1BQ9Y3E0 138 aa13.63□□□□□ -0.23
CPSF7-204ENST00000413232 CFDP00746 253 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-204ENST00000413232 HBE1P02100 147 aa13.62□□□□□ -0.23
CPSF7-204ENST00000413232 HTN3P15516 51 aa13.62□□□□□ -0.23
CPSF7-204ENST00000413232 MEOX2P50222 304 aa13.62□□□□□ -0.23
CPSF7-204ENST00000413232 ID3Q02535 119 aa13.62□□□□□ -0.23
CPSF7-204ENST00000413232 OR1B1Q8NGR6 318 aa13.62□□□□□ -0.23
CPSF7-204ENST00000413232 C7orf50Q9BRJ6 194 aaKnown RBP13.62□□□□□ -0.23
CPSF7-204ENST00000413232 SLC45A2Q9UMX9 530 aa13.62□□□□□ -0.23
CPSF7-204ENST00000413232 PCLOQ9Y6V0 5065 aa13.62□□□□□ -0.23
CPSF7-204ENST00000413232 DYNC1H1Q14204 4646 aaKnown RBP13.62□□□□□ -0.23
CPSF7-204ENST00000413232 IGLV2-18A0A075B6J9 118 aa13.61□□□□□ -0.23
CPSF7-204ENST00000413232 PMS2P5A8MQ11 134 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms