RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 HIST2H2BEQ16778 126 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.24■□□□□ 0.19
USP39-203ENST00000409470 FRZBQ92765 325 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 HIST1H2BHQ93079 126 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 HIST1H2BNQ99877 126 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 HIST1H2BMQ99879 126 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 SHANK2-AS3Q9BTD1 123 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 HIF1ANQ9NWT6 349 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 TMEM14CQ9P0S9 112 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 MOB4Q9Y3A3 225 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 CSMD1Q96PZ7 3565 aa16.24■□□□□ 0.19
USP39-203ENST00000409470 SCGB2A1O75556 95 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 MGST1P10620 155 aaKnown RBP16.23■□□□□ 0.19
USP39-203ENST00000409470 SLC25A16P16260 332 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 GNG5P63218 68 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 EPDR1Q9UM22 224 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 WI2-2373I1.2A0A1W2PRP0 233 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 OR2T8A6NH00 312 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 SLC17A3O00476 420 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 TRGC1P0CF51 173 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 BTF3L4Q96K17 158 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 MEGF9Q9H1U4 602 aa16.23■□□□□ 0.19
USP39-203ENST00000409470 UBR5O95071 2799 aaPredicted RBP16.22■□□□□ 0.19
USP39-203ENST00000409470 TRAV34A0A0B4J273 112 aa16.22■□□□□ 0.19
USP39-203ENST00000409470 H3BRN7 92 aa16.22■□□□□ 0.19
USP39-203ENST00000409470 TMEM68Q96MH6 324 aa16.22■□□□□ 0.19
USP39-203ENST00000409470 Q9H3A6 140 aa16.22■□□□□ 0.19
USP39-203ENST00000409470 RPH3ALQ9UNE2 315 aa16.22■□□□□ 0.19
USP39-203ENST00000409470 CRYBG3Q68DQ2 2970 aa16.22■□□□□ 0.19
USP39-203ENST00000409470 ZNF320A2RRD8 509 aa16.21■□□□□ 0.19
USP39-203ENST00000409470 LINC01548A6NM66 108 aa16.21■□□□□ 0.19
USP39-203ENST00000409470 IGLV2-8P01709 118 aa16.21■□□□□ 0.19
USP39-203ENST00000409470 HIST1H1EP10412 219 aaKnown RBP16.21■□□□□ 0.19
USP39-203ENST00000409470 FCGR2BP31994 310 aaPredicted RBP16.21■□□□□ 0.19
USP39-203ENST00000409470 S100A7AQ86SG5 101 aa16.21■□□□□ 0.19
USP39-203ENST00000409470 BPIFA4PQ86YQ2 179 aa16.21■□□□□ 0.19
USP39-203ENST00000409470 PIFOQ8TCI5 191 aa16.21■□□□□ 0.19
USP39-203ENST00000409470 G3V318 75 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 GCGP01275 180 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 TYMSP04818 313 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 NHLRC2Q8NBF2 726 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 VN1R17PQ8TDU5 208 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 TXN2Q99757 166 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 ZNF586Q9NXT0 402 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 IL36BQ9NZH7 164 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 LRRK2Q5S007 2527 aa16.21■□□□□ 0.18
USP39-203ENST00000409470 UBE2G1P62253 170 aa16.2■□□□□ 0.18
USP39-203ENST00000409470 USF2Q15853 346 aaPredicted RBP16.2■□□□□ 0.18
USP39-203ENST00000409470 BAGE2Q86Y30 109 aa16.2■□□□□ 0.18
USP39-203ENST00000409470 C5orf17Q8NAS9 161 aa16.2■□□□□ 0.18
USP39-203ENST00000409470 RNASE7Q9H1E1 156 aaKnown RBP16.2■□□□□ 0.18
USP39-203ENST00000409470 TRAV20A0A0B4J274 112 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 ISLRO14498 428 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 PHOX2AO14813 284 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 RHOGP84095 191 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 C15orf32Q32M92 178 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 OR4F17Q8NGA8 305 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 SOX21Q9Y651 276 aaPredicted RBP16.19■□□□□ 0.18
USP39-203ENST00000409470 LINC00518Q8N0U6 118 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 OSTCQ9NRP0 149 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 V9GYV3 84 aa16.19■□□□□ 0.18
USP39-203ENST00000409470 CTSGP08311 255 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 TMEM183BQ1AE95 376 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 RPEL1Q2QD12 228 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 ATG101Q9BSB4 218 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 OTORQ9NRC9 128 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 RNF24Q9Y225 148 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 ZNF98A6NK75 572 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 GATA3P23771 443 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 LY6EQ16553 131 aa16.18■□□□□ 0.18
USP39-203ENST00000409470 IBA57Q5T440 356 aaKnown RBP16.18■□□□□ 0.18
USP39-203ENST00000409470 HOXA5P20719 270 aa16.17■□□□□ 0.18
USP39-203ENST00000409470 COL8A1P27658 744 aa16.17■□□□□ 0.18
USP39-203ENST00000409470 C9orf152Q5JTZ5 239 aa16.17■□□□□ 0.18
USP39-203ENST00000409470 BCL6BQ8N143 479 aaPredicted RBP16.17■□□□□ 0.18
USP39-203ENST00000409470 CHRDL1Q9BU40 450 aa16.17■□□□□ 0.18
USP39-203ENST00000409470 H3BUX3 64 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 AMY1AP04745 511 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 GPR183P32249 361 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 KLK9Q2XQG4 91 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 LINC01356Q8N9X3 169 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 ZNF502Q8TBZ5 544 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 SGK494Q96LW2 274 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 MS4A10Q96PG2 267 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 SERTAD4Q9NUC0 356 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 KLK9Q9UKQ9 250 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 TRBV9A0A0B4J1U6 114 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 AVPP01185 164 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 TCRAP04437 139 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 ACTL10Q5JWF8 245 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 EXOC3-AS1Q8N2X6 119 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 CMTM2Q8TAZ6 248 aa16.16■□□□□ 0.18
USP39-203ENST00000409470 TRBV19A0A075B6N1 114 aa16.15■□□□□ 0.18
USP39-203ENST00000409470 TRAV9-1A0A075B6T8 112 aa16.15■□□□□ 0.18
USP39-203ENST00000409470 IGLC2P0DOY2 106 aa16.15■□□□□ 0.18
USP39-203ENST00000409470 KLF12Q9Y4X4 402 aa16.15■□□□□ 0.18
USP39-203ENST00000409470 TRAV41A0A0B4J266 112 aa16.14■□□□□ 0.17
USP39-203ENST00000409470 S100A9P06702 114 aaKnown RBP16.14■□□□□ 0.17
USP39-203ENST00000409470 ADMP35318 185 aa16.14■□□□□ 0.17
USP39-203ENST00000409470 FMC1Q96HJ9 113 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms