RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 VWC2Q2TAL6 325 aa14.78□□□□□ -0.04
PDLIM2-207ENST00000409417 C1orf194Q5T5A4 169 aa14.78□□□□□ -0.04
PDLIM2-207ENST00000409417 STPG3Q8N7X2 389 aa14.78□□□□□ -0.04
PDLIM2-207ENST00000409417 ORM2P19652 201 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 FCN2Q15485 313 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 ATP6V1FQ16864 119 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 LINC00322Q6ZN03 302 aaPredicted RBP14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 WFDC3Q8IUB2 231 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 STXBP6Q8NFX7 210 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 PPP1R14BQ96C90 147 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 TMEM147Q9BVK8 224 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 UBQLN2Q9UHD9 624 aa14.77□□□□□ -0.04
PDLIM2-207ENST00000409417 ZNF546Q86UE3 836 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 OR11H7Q8NGC8 314 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 OR1B1Q8NGR6 318 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 RBMY1BA6NDE4 496 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 RBMY1EA6NEQ0 496 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 AGPAT2O15120 278 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 RBMY1DP0C7P1 496 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 LINC00869P0C866 280 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 S100A7P31151 101 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 PLP1P60201 277 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 EWSR1Q01844 656 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 NHLH2Q02577 135 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 BAXQ07812 192 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 RAB31Q13636 194 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 SIGLEC15Q6ZMC9 328 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 DCANP1Q8TF63 244 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 MGST2Q99735 147 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 FBXL17Q9UF56 701 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 WDR83OSQ9Y284 106 aa14.76□□□□□ -0.05
PDLIM2-207ENST00000409417 NBEAL2Q6ZNJ1 2754 aa14.75□□□□□ -0.05
PDLIM2-207ENST00000409417 STAB2Q8WWQ8 2551 aa14.75□□□□□ -0.05
PDLIM2-207ENST00000409417 K7EQG2 157 aa14.75□□□□□ -0.05
PDLIM2-207ENST00000409417 HYPMO75409 117 aa14.75□□□□□ -0.05
PDLIM2-207ENST00000409417 HAGHQ16775 308 aa14.75□□□□□ -0.05
PDLIM2-207ENST00000409417 CITED4Q96RK1 184 aa14.75□□□□□ -0.05
PDLIM2-207ENST00000409417 CAMLGP49069 296 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 PXDC1Q5TGL8 231 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 OR8I2Q8N0Y5 310 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 OR5C1Q8NGR4 320 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 MAP6D1Q9H9H5 199 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 NRN1Q9NPD7 142 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 DOK5Q9P104 306 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 MBD2Q9UBB5 411 aa14.74□□□□□ -0.05
PDLIM2-207ENST00000409417 UBE2L5PA0A1B0GUS4 154 aa14.73□□□□□ -0.05
PDLIM2-207ENST00000409417 ZNF98A6NK75 572 aa14.73□□□□□ -0.05
PDLIM2-207ENST00000409417 RAP2BP61225 183 aa14.73□□□□□ -0.05
PDLIM2-207ENST00000409417 FAM24BQ8N5W8 94 aa14.73□□□□□ -0.05
PDLIM2-207ENST00000409417 ASB13Q8WXK3 278 aa14.73□□□□□ -0.05
PDLIM2-207ENST00000409417 HIGD1AQ9Y241 93 aa14.73□□□□□ -0.05
PDLIM2-207ENST00000409417 LYL1P12980 280 aa14.72□□□□□ -0.05
PDLIM2-207ENST00000409417 S100A7AQ86SG5 101 aa14.72□□□□□ -0.05
PDLIM2-207ENST00000409417 APRG1Q8IVJ8 170 aa14.72□□□□□ -0.05
PDLIM2-207ENST00000409417 CHAC2Q8WUX2 184 aa14.72□□□□□ -0.05
PDLIM2-207ENST00000409417 TM2D3Q9BRN9 247 aa14.72□□□□□ -0.05
PDLIM2-207ENST00000409417 SLC25A39Q9BZJ4 359 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-207ENST00000409417 ARL6Q9H0F7 186 aa14.72□□□□□ -0.05
PDLIM2-207ENST00000409417 GIPP09681 153 aaPredicted RBP14.71□□□□□ -0.05
PDLIM2-207ENST00000409417 OR5G3P0C626 314 aa14.71□□□□□ -0.05
PDLIM2-207ENST00000409417 THAP6Q8TBB0 222 aa14.71□□□□□ -0.05
PDLIM2-207ENST00000409417 SHANK2-AS3Q9BTD1 123 aa14.71□□□□□ -0.05
PDLIM2-207ENST00000409417 GGTLC1Q9BX51 225 aa14.71□□□□□ -0.05
PDLIM2-207ENST00000409417 TENM3Q9P273 2699 aa14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 LOC102724200A0A096LPH7 203 aaPredicted RBP14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 MPDU1O75352 247 aa14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 RPL12P30050 165 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 DEFB131AP59861 70 aa14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 CLINT1Q14677 625 aa14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 GPR82Q96P67 336 aa14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 ZMAT4Q9H898 229 aa14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 SLC25A22Q9H936 323 aa14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 SEPSECSQ9HD40 501 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-207ENST00000409417 H3BRN7 92 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 FGF7P21781 194 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 GALR1P47211 349 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 RPL29P47914 159 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 PRR20EP86478 221 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 PRR20CP86479 221 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 PRR20DP86480 221 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 PRR20BP86481 221 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 PRR20AP86496 221 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 PATE2Q6UY27 113 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 UHRF2Q96PU4 802 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 SCRT1Q9BWW7 348 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 ARV1Q9H2C2 271 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 SLC25A32Q9H2D1 315 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 HSPB11Q9Y547 144 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 U3KQK5 164 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 ELOA3CA0A087WX78 387 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 ZNF688P0C7X2 276 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 SNRPD3P62318 126 aaKnown RBP14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 FGL1Q08830 312 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 ZNF124Q15973 351 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 MIC13Q5XKP0 118 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 LEMD1Q68G75 181 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 Q6ZRG5 221 aa14.69□□□□□ -0.06
PDLIM2-207ENST00000409417 OPCMLQ14982 345 aa14.68□□□□□ -0.06
PDLIM2-207ENST00000409417 SPATA25Q9BR10 227 aa14.68□□□□□ -0.06
PDLIM2-207ENST00000409417 NPCDR1Q9BY65 106 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms