RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PRELID3BQ9Y3B1 194 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 ALG5Q9Y673 324 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMEM56-RWDD3S4R434 201 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 F8P00451 2351 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 SVEP1Q4LDE5 3571 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 ANK3Q12955 4377 aaKnown RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 AKAP9Q99996 3911 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 CELSR1Q9NYQ6 3014 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGHV1-3A0A0C4DH29 117 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 A0A1W2PPE3 182 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RBMY1BA6NDE4 496 aaKnown RBP3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RBMY1EA6NEQ0 496 aaKnown RBP3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 H0YJW9 148 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 NPFFO15130 113 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SSNA1O43805 119 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 CD5LO43866 347 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR2A4O95047 310 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 HPRT1P00492 218 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 INSP01308 110 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGHV3-7P01780 117 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 APOA2P02652 100 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 ARG1P05089 322 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SERPINE2P07093 398 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RBMY1DP0C7P1 496 aaKnown RBP3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RBMY1A1P0DJD3 496 aaKnown RBP3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SULT1A3P0DMM9 295 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SULT1A4P0DMN0 295 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SLC25A6P12236 298 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 VDAC2P45880 294 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 LGALS7P47929 136 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RAB13P51153 203 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 BCAP31P51572 246 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 KLRD1Q13241 179 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 EBI3Q14213 229 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RTL8BQ17RB0 113 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RPL39P5Q59GN2 51 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 TPTE2P1Q5T6R2 138 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 Q6ZN92 141 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 PDPNQ86YL7 162 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNF695Q8IW36 515 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR4C13Q8NGP0 309 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR51H1Q8NH63 302 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR4S2Q8NH73 311 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 RBPMSQ93062 196 aaKnown RBP3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 LSM10Q969L4 123 aaKnown RBP3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR2A7Q96R45 310 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 TP53RKQ96S44 253 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 CLCC1Q96S66 551 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SPIN2AQ99865 258 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SPIN2BQ9BPZ2 258 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 SEC22CQ9BRL7 303 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 BEX2Q9BXY8 128 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 MED28Q9H204 178 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 BEX1Q9HBH7 125 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 COA4Q9NYJ1 87 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 COMMD9Q9P000 198 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 CACFD1Q9UGQ2 172 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 WASHC3Q9Y3C0 194 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZFHX3Q15911 3703 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 MTORP42345 2549 aa3.25□□□□□ -1.89
HMGB3P19-201ENST00000403971 TRAV40A0A0B4J280 105 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 KIR2DL5BA0A0G2JN68 375 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 KIR2DL5BA0A0G2JPC4 375 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 A0A1B0GVG6 124 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 VGLL3A8MV65 326 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 MOSP00540 346 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 HRASP01112 189 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 IFNA21P01568 189 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 FBP1P09467 338 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 GIPP09681 153 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 NQO2P16083 231 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 BRS3P32247 399 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 LPAR6P43657 344 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 DLX1P56177 255 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 DIAPH2-AS1Q14236 149 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 SLC9A3R2Q15599 337 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 SSX2Q16385 188 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 SP6Q3SY56 376 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 NMSQ5H8A3 153 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 LDLRAD2Q5SZI1 272 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 CASC10Q5T4H9 136 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 SELENOHQ8IZQ5 122 aaKnown RBP3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 KIR2DL5AQ8N109 375 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR11H7Q8NGC8 314 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 KIR2DL5BQ8NHK3 375 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 LHFPL5Q8TAF8 219 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 VSTM2AQ8TAG5 236 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 CASTOR1Q8WTX7 329 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 FLYWCH2Q96CP2 140 aaKnown RBP3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 SLC35E1Q96K37 410 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 LINC00167Q96N53 147 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 TSNAXQ99598 290 aaKnown RBP3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 RASL11BQ9BPW5 248 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 MRPL20Q9BYC9 149 aaKnown RBP3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 BET1LQ9NYM9 111 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNRD1Q9P1U0 126 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 NUP50Q9UKX7 468 aa3.24□□□□□ -1.89
HMGB3P19-201ENST00000403971 HIVEP1P15822 2718 aa3.23□□□□□ -1.89
HMGB3P19-201ENST00000403971 NACAE9PAV3 2078 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 224.6 ms