RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 CD109Q6YHK3 1445 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 NUP210LQ5VU65 1888 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 TRGV4A0A0C4DH28 118 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 C19orf84I3L1E1 186 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 GADD45GO95257 159 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 MGST1P10620 155 aaKnown RBP2.82□□□□□ -1.96
CEP290-202ENST00000397838 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 RNASE10Q5GAN6 216 aaKnown RBP2.82□□□□□ -1.96
CEP290-202ENST00000397838 CCDC88CQ9P219 2028 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 CACNA1GO43497 2377 aa2.82□□□□□ -1.96
CEP290-202ENST00000397838 N4BP2Q86UW6 1770 aaPredicted RBP2.81□□□□□ -1.96
CEP290-202ENST00000397838 OR9Q1Q8NGQ5 310 aa2.81□□□□□ -1.96
CEP290-202ENST00000397838 MAFIPQ8WZ33 124 aa2.81□□□□□ -1.96
CEP290-202ENST00000397838 BAZ2BQ9UIF8 2168 aaKnown RBP2.81□□□□□ -1.96
CEP290-202ENST00000397838 RAB4BP61018 213 aa2.81□□□□□ -1.96
CEP290-202ENST00000397838 PATE2Q6UY27 113 aa2.81□□□□□ -1.96
CEP290-202ENST00000397838 SKA2Q8WVK7 121 aaPredicted RBP2.81□□□□□ -1.96
CEP290-202ENST00000397838 NIT2Q9NQR4 276 aa2.81□□□□□ -1.96
CEP290-202ENST00000397838 KDM5BQ9UGL1 1544 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 GGCTO75223 188 aaKnown RBP2.8□□□□□ -1.96
CEP290-202ENST00000397838 ASAH2BP0C7U1 165 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 BCL2P10415 239 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 SARNPP82979 210 aaKnown RBP2.8□□□□□ -1.96
CEP290-202ENST00000397838 ZNF846Q147U1 533 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 OR8B8Q15620 311 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 ADAT1Q9BUB4 502 aaKnown RBP2.8□□□□□ -1.96
CEP290-202ENST00000397838 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CEP290-202ENST00000397838 DOCK10Q96BY6 2186 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 COL4A2P08572 1712 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 IGKV3D-11A0A0A0MRZ8 115 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 KPNA4O00629 521 aaPredicted RBP2.8□□□□□ -1.96
CEP290-202ENST00000397838 TIMM17BO60830 172 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 C1QCP02747 245 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 P0DMU3 169 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 FAM231AP0DMU4 169 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 FAM231CP0DMU5 169 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 SCGB1A1P11684 91 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 COX6A1P12074 109 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 FUSP35637 526 aaKnown RBP eCLIP2.8□□□□□ -1.96
CEP290-202ENST00000397838 HBBP68871 147 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 EIF5AL1Q6IS14 154 aaKnown RBP2.8□□□□□ -1.96
CEP290-202ENST00000397838 C10orf126Q8N4M7 172 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 AIF1LQ9BQI0 150 aa2.8□□□□□ -1.96
CEP290-202ENST00000397838 MYO5AQ9Y4I1 1855 aaKnown RBP2.79□□□□□ -1.96
CEP290-202ENST00000397838 HLA-EP13747 358 aa2.79□□□□□ -1.96
CEP290-202ENST00000397838 FREM1Q5H8C1 2179 aa2.79□□□□□ -1.96
CEP290-202ENST00000397838 H3BRN7 92 aa2.79□□□□□ -1.96
CEP290-202ENST00000397838 DHFRP00374 187 aa2.79□□□□□ -1.96
CEP290-202ENST00000397838 IGKV4-1P06312 121 aa2.79□□□□□ -1.96
CEP290-202ENST00000397838 METTL15P1P0C7V9 234 aa2.79□□□□□ -1.96
CEP290-202ENST00000397838 SLC50A1Q9BRV3 221 aa2.79□□□□□ -1.96
CEP290-202ENST00000397838 FN1P02751 2386 aaKnown RBP2.79□□□□□ -1.96
CEP290-202ENST00000397838 BCL9O00512 1426 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 TRGV10A0A0A0MS01 117 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 OVOL1O14753 267 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 DEGS1O15121 323 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 OR10J4P0C629 311 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 FABP2P12104 132 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 ESRGQ1W209 222 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 ZNF826PQ6ZT77 177 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 C7orf65Q6ZTY9 151 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 IFT20Q8IY31 132 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 TEX29Q8N6K0 151 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 RTEL1-TNFRSF6BF6WH68 1400 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 KIAA1109Q2LD37 5005 aa2.78□□□□□ -1.96
CEP290-202ENST00000397838 PFDN1O60925 122 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 PSPHP78330 225 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 PLCXD2Q0VAA5 305 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 CROCCP2Q86T23 111 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 OR4K15Q8NH41 348 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 CXCL16Q9H2A7 254 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 CACYBPQ9HB71 228 aaKnown RBP2.78□□□□□ -1.97
CEP290-202ENST00000397838 RIC1Q4ADV7 1423 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 HEATR5BQ9P2D3 2071 aa2.78□□□□□ -1.97
CEP290-202ENST00000397838 COL4A4P53420 1690 aaPredicted RBP2.77□□□□□ -1.97
CEP290-202ENST00000397838 SDCBPO00560 298 aaPredicted RBP2.77□□□□□ -1.97
CEP290-202ENST00000397838 LYZL6O75951 148 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 SDC4P31431 198 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 EIF3IQ13347 325 aaKnown RBP2.77□□□□□ -1.97
CEP290-202ENST00000397838 PHF5AQ7RTV0 110 aaKnown RBP2.77□□□□□ -1.97
CEP290-202ENST00000397838 YPEL2Q96QA6 119 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 A0A1B0GW64 132 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 NDUFA5Q16718 116 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 DEFB128Q7Z7B8 93 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 ZNF714Q96N38 554 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 LAMTOR2Q9Y2Q5 125 aa2.77□□□□□ -1.97
CEP290-202ENST00000397838 J3KT08 172 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 CST7O76096 145 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 TMEM229BQ8NBD8 167 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 ISOC1Q96CN7 298 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 RETNLBQ9BQ08 111 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 GLI3P10071 1580 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 TRAV36DV7A0A075B6V5 113 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 M0QZK8 103 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 FAM107BQ9H098 131 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 RASL12Q9NYN1 266 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 LAMTOR3Q9UHA4 124 aa2.76□□□□□ -1.97
CEP290-202ENST00000397838 ABCA2Q9BZC7 2435 aa2.75□□□□□ -1.97
CEP290-202ENST00000397838 C7orf71A4D174 169 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 297.6 ms