RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 GRPP07492 148 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 NPPCP23582 126 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 GDF1P27539 372 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 PRR7Q8TB68 274 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 AAMDCQ9H7C9 122 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 TMEM167BQ9NRX6 74 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 COX8AP10176 69 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 CCL4P13236 92 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 QRFPP83859 136 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 CFAP46Q8IYW2 2715 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 SMAD7O15105 426 aaKnown RBP6.96□□□□□ -1.29
NDE1-202ENST00000396355 TBR1Q16650 682 aa6.96□□□□□ -1.29
NDE1-202ENST00000396355 ZNF718Q3SXZ3 478 aa6.96□□□□□ -1.29
NDE1-202ENST00000396355 OR4C13Q8NGP0 309 aa6.96□□□□□ -1.29
NDE1-202ENST00000396355 OR1L1Q8NH94 360 aa6.96□□□□□ -1.29
NDE1-202ENST00000396355 RAB1CQ92928 201 aa6.96□□□□□ -1.29
NDE1-202ENST00000396355 ERG28Q9UKR5 140 aa6.96□□□□□ -1.29
NDE1-202ENST00000396355 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.29
NDE1-202ENST00000396355 NDUFA3O95167 84 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 B4GALT1P15291 398 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 FOLR3P41439 243 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 Q6ZRM9 215 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 VKORC1L1Q8N0U8 176 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 NPIPB3Q92617 1050 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 GRAMD2BQ96HH9 432 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 FOXC2Q99958 501 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 JPT1Q9UK76 154 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 HOXA3O43365 443 aaPredicted RBP6.96□□□□□ -1.3
NDE1-202ENST00000396355 ZNF56Q15929 161 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 PPP1R27Q86WC6 154 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 RPS19BP1Q86WX3 136 aaKnown RBP6.96□□□□□ -1.3
NDE1-202ENST00000396355 DTX1Q86Y01 620 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 MGAQ8IWI9 3026 aa6.96□□□□□ -1.3
NDE1-202ENST00000396355 IGKV1-9A0A0C4DH69 117 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 CKS2P33552 79 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 CCL11P51671 97 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 C6orf15Q6UXA7 325 aaPredicted RBP6.95□□□□□ -1.3
NDE1-202ENST00000396355 MIR17HGQ75NE6 70 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 NFAM1Q8NET5 270 aaPredicted RBP6.95□□□□□ -1.3
NDE1-202ENST00000396355 C5orf63A6NC05 138 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 E9PLN8 166 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 RS1O15537 224 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 FXYD2P54710 66 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 ABHD17BQ5VST6 288 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 PRNTQ86SH4 94 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 SRSF12Q8WXF0 261 aaKnown RBP6.95□□□□□ -1.3
NDE1-202ENST00000396355 CHAC1Q9BUX1 264 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 A0A096LPE4 126 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 A0A1W2PPZ6 126 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 FNDC10F2Z333 226 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 H0YJW9 148 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 Q6ZUT4 128 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 AAED1Q7RTV5 226 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 OR9G4Q8NGQ1 327 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 Q96M66 194 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 C1orf147Q96MC9 270 aaPredicted RBP6.95□□□□□ -1.3
NDE1-202ENST00000396355 FBXL15Q9H469 300 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 LHFPL6Q9Y693 200 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 IGHV1-24A0A0C4DH33 117 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 YPEL1O60688 119 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 PRSS2P07478 247 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 PTGDSP41222 190 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 TBC1D28Q2M2D7 210 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 TEPPQ6URK8 271 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 YPEL2Q96QA6 119 aa6.95□□□□□ -1.3
NDE1-202ENST00000396355 TRAV8-4A0A0B4J246 113 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 PGPA6NDG6 321 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 LIPT2A6NK58 231 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 FABP5P3A8MUU1 101 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 M0R3E3 92 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 SSBP2P81877 361 aaPredicted RBP6.94□□□□□ -1.3
NDE1-202ENST00000396355 NUP35Q8NFH5 326 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 SFXN3Q9BWM7 321 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 C9JAW5 83 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 SSR4P51571 173 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 SPATA46Q5T0L3 261 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 CRIP3Q6Q6R5 217 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 PPP1R32Q7Z5V6 425 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 CXorf67Q86X51 503 aaPredicted RBP6.94□□□□□ -1.3
NDE1-202ENST00000396355 DLX4Q92988 240 aaPredicted RBP6.94□□□□□ -1.3
NDE1-202ENST00000396355 CENPEQ02224 2701 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 IGHV3-21A0A0B4J1V1 117 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 DHHO43323 396 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 TMEM211Q6ICI0 200 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 RNF138Q8WVD3 245 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 ABHD14BQ96IU4 210 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 MPC1Q9Y5U8 109 aa6.94□□□□□ -1.3
NDE1-202ENST00000396355 TRBV20OR9-2A0A075B6H5 130 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 TRAV9-1A0A075B6T8 112 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 CXCL13O43927 109 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 FCN3O75636 299 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 APELAP0DMC3 54 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 PAX9P55771 341 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 RIGQ13278 110 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 ST8SIA1Q92185 356 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 FAM168AQ92567 244 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 GPR82Q96P67 336 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 RTL8AQ9BWD3 113 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 hADV38S2A0JD32 116 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms