RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 OR10W1Q8NGF6 305 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 MS4A6AQ9H2W1 248 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 SPCS1Q9Y6A9 102 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 LYPD3O95274 346 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 ZNF138P52744 262 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 ZCCHC24Q8N2G6 241 aaKnown RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 GGTLC1Q9BX51 225 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 CLDN16Q9Y5I7 305 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 LAMTOR2Q9Y2Q5 125 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 NEUROG3Q9Y4Z2 214 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 TRBV24-1A0A075B6N3 115 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 IGKV3D-20A0A0C4DH25 116 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 A0A1B0GW64 132 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 PYYP10082 97 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 GNG5P63218 68 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 DMRTA1Q5VZB9 504 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 C1QL4Q86Z23 238 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 GSN-AS1Q9NRJ2 163 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 TANC2Q9HCD6 1990 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 UBE2CO00762 179 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 TPTE2P1Q5T6R2 138 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 A0A0G2JNJ9 132 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM238C9JI98 176 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 FGF16O43320 207 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 CD28P10747 220 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 LY6DQ14210 128 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 Q6ZS49 121 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 Q9UFV3 132 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 SRSF6Q13247 344 aaKnown RBP4.49□□□□□ -1.69
VPS13C-204ENST00000395898 C3orf36Q3SXR2 165 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 FGFBP3Q8TAT2 258 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 NDUFS8O00217 210 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BKO60814 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BJP06899 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HTN3P15516 51 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BOP23527 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BBP33778 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BDP58876 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BCP62807 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST2H2BEQ16778 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BHQ93079 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BNQ99877 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 HIST1H2BMQ99879 126 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 C11orf68Q9H3H3 251 aaKnown RBP4.49□□□□□ -1.69
VPS13C-204ENST00000395898 PDE6HQ13956 83 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 ST6GALNAC3Q8NDV1 305 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 IFI27L1Q96BM0 104 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 MGST2Q99735 147 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 TRAV9-2A0A087WT02 112 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 TRAV8-2A0A0B4J237 113 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 NAPSAO96009 420 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 C1QTNF9P0C862 333 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 C9orf139Q6ZV77 190 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 ARHGAP21Q5T5U3 1957 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 A0A087WX48 190 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 PINLYPA6NC86 204 aa4.49□□□□□ -1.69
VPS13C-204ENST00000395898 PNRC2Q9NPJ4 139 aaKnown RBP4.49□□□□□ -1.69
VPS13C-204ENST00000395898 SNAI2O43623 268 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 AGMATQ9BSE5 352 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 PRR32B1ATL7 298 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 GGTLC3B5MD39 225 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 H0YJW9 148 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 EVI2AP22794 236 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 RPL36AP83881 106 aaKnown RBP4.48□□□□□ -1.69
VPS13C-204ENST00000395898 PSG3Q16557 428 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 RPL36ALQ969Q0 106 aaKnown RBP4.48□□□□□ -1.69
VPS13C-204ENST00000395898 RCHY1Q96PM5 261 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 SSBP4Q9BWG4 385 aaPredicted RBP4.48□□□□□ -1.69
VPS13C-204ENST00000395898 TOMM40O96008 361 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 C5orf64Q2M2E5 130 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 MLNRO43193 412 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 GAS1P54826 345 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 LINC00469Q8N7U9 141 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 LY96Q9Y6Y9 160 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 FREM1Q5H8C1 2179 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 LDLRAD4O15165 306 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 PSPNO60542 156 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 S100A7L2Q5SY68 101 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 ZNF815PA8K554 130 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 IGKV1-12A0A0C4DH73 117 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 M0R2P5 195 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 VCYO14598 125 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 IGKV1D-12P01611 117 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 NMSQ5H8A3 153 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 LINC01356Q8N9X3 169 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 MDS2Q8NDY4 140 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 CHCHD5Q9BSY4 110 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 KIAA1549Q9HCM3 1950 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 SAP30O75446 220 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 SUPT4H1P63272 117 aaKnown RBP4.48□□□□□ -1.69
VPS13C-204ENST00000395898 SIGLEC9Q9Y336 463 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 HCFC1P51610 2035 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM155Q4W5P6 130 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM14EPQ6UXP3 125 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 RFNGQ9Y644 331 aa4.48□□□□□ -1.69
VPS13C-204ENST00000395898 MED13Q9UHV7 2174 aa4.47□□□□□ -1.69
VPS13C-204ENST00000395898 NCOA6Q14686 2063 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-204ENST00000395898 LYNX1G3V0Z9 82 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms