RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 C21orf62Q9NYP8 219 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 KLF12Q9Y4X4 402 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 MED12Q93074 2177 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 NCOA6Q14686 2063 aaPredicted RBP7.25□□□□□ -1.25
MSH5-205ENST00000395853 FAM90A18PA6NE21 464 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 FAM90A16PA6NEW6 464 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 FAM90A8PA6NJQ4 464 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 FAM90A9PA6NNJ1 464 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 SRSF10O75494 262 aaKnown RBP7.25□□□□□ -1.25
MSH5-205ENST00000395853 OR2J3O76001 311 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 IGLC6P0CF74 106 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 RNPS1Q15287 305 aaKnown RBP7.25□□□□□ -1.25
MSH5-205ENST00000395853 TMEM219Q86XT9 240 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 OR52N5Q8NH56 324 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 PSENENQ9NZ42 101 aa7.25□□□□□ -1.25
MSH5-205ENST00000395853 YTHDF2Q9Y5A9 579 aaKnown RBP7.25□□□□□ -1.25
MSH5-205ENST00000395853 SMIM27A0A1W2PRY6 76 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 IZUMO1RA6ND01 250 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 RNF144BQ7Z419 303 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 TEN1Q86WV5 123 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 PIEZO2Q9H5I5 2752 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 GGTLC3B5MD39 225 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.24□□□□□ -1.25
MSH5-205ENST00000395853 ASIPP42127 132 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 ZDHHC23Q8IYP9 409 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 CARD19Q96LW7 228 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 LINC00479Q96M42 142 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 HDHD3Q9BSH5 251 aaPredicted RBP7.24□□□□□ -1.25
MSH5-205ENST00000395853 OSTCQ9NRP0 149 aa7.24□□□□□ -1.25
MSH5-205ENST00000395853 NDUFA7O95182 113 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 WT1P19544 449 aaPredicted RBP7.23□□□□□ -1.25
MSH5-205ENST00000395853 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
MSH5-205ENST00000395853 DSCR4P56555 118 aaPredicted RBP7.23□□□□□ -1.25
MSH5-205ENST00000395853 TNFAIP6P98066 277 aaPredicted RBP7.23□□□□□ -1.25
MSH5-205ENST00000395853 SLC38A11Q08AI6 406 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 HES1Q14469 280 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 C6orf201Q7Z4U5 140 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 F11RQ9Y624 299 aaKnown RBP7.23□□□□□ -1.25
MSH5-205ENST00000395853 DNPH1O43598 174 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 OR2H2O95918 312 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 MPV17P39210 176 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 FXYD3Q14802 87 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 TBC1D26Q86UD7 250 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 SPANXCQ9NY87 97 aa7.23□□□□□ -1.25
MSH5-205ENST00000395853 C19orf25Q9UFG5 118 aaPredicted RBP7.23□□□□□ -1.25
MSH5-205ENST00000395853 TLN1Q9Y490 2541 aaKnown RBP7.23□□□□□ -1.25
MSH5-205ENST00000395853 C8orf88P0DMB2 117 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 IAPPP10997 89 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
MSH5-205ENST00000395853 OR1L4Q8NGR5 311 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 OR51H1Q8NH63 302 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 FAM234AQ9H0X4 552 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 RNASE7Q9H1E1 156 aaKnown RBP7.22□□□□□ -1.25
MSH5-205ENST00000395853 LOC101059948A0A1B0GTJ6 334 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 MS4A18H0YCH9 400 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 SYNGR2O43760 224 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 EFNA2O43921 213 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 PDCD6O75340 191 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 PPYP01298 95 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 CCL4P13236 92 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 CTLA4P16410 223 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 HERVK_113P63121 156 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 TBC1D28Q2M2D7 210 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 MS4A18Q3C1V0 323 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 MRPL14Q6P1L8 145 aaKnown RBP7.22□□□□□ -1.25
MSH5-205ENST00000395853 NUP35Q8NFH5 326 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 OR4C13Q8NGP0 309 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 FZR1Q9UM11 496 aa7.22□□□□□ -1.25
MSH5-205ENST00000395853 TINCRA0A1B0GVN0 87 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 ENSAO43768 121 aaKnown RBP7.21□□□□□ -1.25
MSH5-205ENST00000395853 CRLF1O75462 422 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 DEFA4P12838 97 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 MFAP2P55001 183 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 RPS18P62269 152 aaKnown RBP7.21□□□□□ -1.25
MSH5-205ENST00000395853 EDDM3AQ14507 147 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 PIGCQ92535 297 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 HIGD1BQ9P298 99 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 SDK2Q58EX2 2172 aa7.21□□□□□ -1.25
MSH5-205ENST00000395853 A0A0J9YW62 118 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 TCRBV4S1A1TA0A5B7 111 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 H3BML4 177 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 ZFAND5O76080 213 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 KLRB1Q12918 225 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 RRN3P1Q2M238 152 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 SPRNQ5BIV9 151 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 SPANXN5Q5MJ07 72 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 OR5AS1Q8N127 324 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 ZNF808Q8N4W9 903 aaPredicted RBP7.21□□□□□ -1.26
MSH5-205ENST00000395853 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 V9GYY9 64 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 IGLV1-36A0A0B4J1U3 117 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 OOSP1A8MZH6 123 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 NMUP48645 174 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 DLX6P56179 175 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 MBNL2Q5VZF2 373 aaKnown RBP7.21□□□□□ -1.26
MSH5-205ENST00000395853 Q6ZQT7 251 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 PCP2Q8IVA1 136 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 C10orf126Q8N4M7 172 aa7.21□□□□□ -1.26
MSH5-205ENST00000395853 RNF138Q8WVD3 245 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms