RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 PRSS33Q8NF86 280 aa16.51■□□□□ 0.23
CLK3-202ENST00000395066 RNASE8Q8TDE3 154 aaKnown RBP16.51■□□□□ 0.23
CLK3-202ENST00000395066 IGHV1-69-2A0A0G2JMI3 117 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 DLX6P56179 175 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 VMA21Q3ZAQ7 101 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 ATP5L2Q7Z4Y8 100 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 SPATA12Q7Z6I5 190 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 C7orf69Q9H7B7 122 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 MUC15Q8N387 334 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 CLEC5AQ9NY25 188 aa16.5■□□□□ 0.23
CLK3-202ENST00000395066 A0A1B0GXF2 115 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 INS-IGF2F8WCM5 200 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 IGHV1-8P0DP01 117 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 MYCNOSP40205 109 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 EPDR1Q9UM22 224 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 M0QZ24 198 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 PRRG2O14669 202 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 TNFRSF13BO14836 293 aaPredicted RBP16.49■□□□□ 0.23
CLK3-202ENST00000395066 IGF2-ASQ6U949 168 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 OR4A5Q8NH83 315 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 ZNF596Q8TC21 504 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 IGFBPL1Q8WX77 278 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 RNASE6Q93091 150 aaKnown RBP16.49■□□□□ 0.23
CLK3-202ENST00000395066 URB1-AS1Q96HZ7 61 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 TMEM70Q9BUB7 260 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 DYNLRB1Q9NP97 96 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 OR2D3Q8NGH3 330 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 ABHD17AQ96GS6 310 aa16.49■□□□□ 0.23
CLK3-202ENST00000395066 TMEM155Q4W5P6 130 aa16.48■□□□□ 0.23
CLK3-202ENST00000395066 PRR30Q53SZ7 412 aaPredicted RBP16.48■□□□□ 0.23
CLK3-202ENST00000395066 ASCL2Q99929 193 aa16.48■□□□□ 0.23
CLK3-202ENST00000395066 TRAV8-1A0A0A6YYK1 113 aa16.47■□□□□ 0.23
CLK3-202ENST00000395066 SH2D7A6NKC9 451 aaPredicted RBP16.47■□□□□ 0.23
CLK3-202ENST00000395066 NBEAP1P0C6P0 100 aa16.47■□□□□ 0.23
CLK3-202ENST00000395066 RBX1P62877 108 aa16.47■□□□□ 0.23
CLK3-202ENST00000395066 CEP295Q9C0D2 2601 aa16.47■□□□□ 0.23
CLK3-202ENST00000395066 LINC00311Q8N616 119 aa16.47■□□□□ 0.23
CLK3-202ENST00000395066 PERPQ96FX8 193 aa16.47■□□□□ 0.23
CLK3-202ENST00000395066 E7EQL1 145 aa16.46■□□□□ 0.23
CLK3-202ENST00000395066 FOXA3P55318 350 aaPredicted RBP16.46■□□□□ 0.23
CLK3-202ENST00000395066 HBBP68871 147 aa16.46■□□□□ 0.23
CLK3-202ENST00000395066 PTPRZ1P23471 2315 aaPredicted RBP16.46■□□□□ 0.23
CLK3-202ENST00000395066 OR4C46A6NHA9 309 aa16.46■□□□□ 0.22
CLK3-202ENST00000395066 RPL27AP46776 148 aaKnown RBP16.46■□□□□ 0.22
CLK3-202ENST00000395066 FBLN7Q53RD9 439 aa16.46■□□□□ 0.22
CLK3-202ENST00000395066 FAM120AOSQ5T036 256 aa16.46■□□□□ 0.22
CLK3-202ENST00000395066 FAM162BQ5T6X4 162 aa16.46■□□□□ 0.22
CLK3-202ENST00000395066 SSX8Q7RTT4 187 aa16.46■□□□□ 0.22
CLK3-202ENST00000395066 GFRALQ6UXV0 394 aa16.45■□□□□ 0.22
CLK3-202ENST00000395066 TMEM133Q9H2Q1 129 aa16.45■□□□□ 0.22
CLK3-202ENST00000395066 TLN1Q9Y490 2541 aaKnown RBP16.45■□□□□ 0.22
CLK3-202ENST00000395066 ABCA4P78363 2273 aa16.45■□□□□ 0.22
CLK3-202ENST00000395066 K7EP13 123 aa16.45■□□□□ 0.22
CLK3-202ENST00000395066 COX7A1P24310 79 aa16.45■□□□□ 0.22
CLK3-202ENST00000395066 C22orf15Q8WYQ4 148 aa16.45■□□□□ 0.22
CLK3-202ENST00000395066 ZNF835Q9Y2P0 537 aa16.45■□□□□ 0.22
CLK3-202ENST00000395066 LOC105371242A0A075B767 164 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 IGHV2-70DA0A0C4DH43 119 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 GTSF1Q8WW33 167 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 RPP21Q9H633 154 aaKnown RBP16.44■□□□□ 0.22
CLK3-202ENST00000395066 TP73-AS1Q9UF72 201 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 ARHGAP32A7KAX9 2087 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 SHISA9B4DS77 424 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 CRXO43186 299 aaPredicted RBP16.44■□□□□ 0.22
CLK3-202ENST00000395066 CRYGCP07315 174 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 GP9P14770 177 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 CA7P43166 264 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 ZNF137PP52743 207 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 LYZP61626 148 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 SMIM12Q96EX1 92 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 PGLYRP4Q96LB8 373 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 GPR82Q96P67 336 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 Q9H3A6 140 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 FBXL15Q9H469 300 aa16.44■□□□□ 0.22
CLK3-202ENST00000395066 MC5RP33032 325 aa16.43■□□□□ 0.22
CLK3-202ENST00000395066 FAM71F2Q6NXP2 309 aa16.43■□□□□ 0.22
CLK3-202ENST00000395066 Q8NA96 180 aa16.43■□□□□ 0.22
CLK3-202ENST00000395066 ST20Q9HBF5 79 aa16.43■□□□□ 0.22
CLK3-202ENST00000395066 KLF12Q9Y4X4 402 aa16.43■□□□□ 0.22
CLK3-202ENST00000395066 IGHV1-24A0A0C4DH33 117 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 EXOC3-AS1Q8N2X6 119 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 MLST8Q9BVC4 326 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 C1RLQ9NZP8 487 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 SIGLEC9Q9Y336 463 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 A8MWL6 223 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 SYS1-DBNDD2H3BUS1 97 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 LINC00173Q6ZV60 143 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 OR4C5Q8NGB2 326 aa16.42■□□□□ 0.22
CLK3-202ENST00000395066 CHCHD1Q96BP2 118 aaKnown RBP16.42■□□□□ 0.22
CLK3-202ENST00000395066 LGALS7P47929 136 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 CIARTQ8N365 385 aaPredicted RBP16.41■□□□□ 0.22
CLK3-202ENST00000395066 STXBP6Q8NFX7 210 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 TRGV9Q99603 122 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 PRSS22Q9GZN4 317 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 INSIG2Q9Y5U4 225 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 PSG1P11464 419 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 MPV17L2Q567V2 206 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 NBASA2RRP1 2371 aa16.41■□□□□ 0.22
CLK3-202ENST00000395066 LEPROTL1O95214 131 aa16.4■□□□□ 0.22
CLK3-202ENST00000395066 P01737 135 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms