RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 A0A0G2JLM5 398 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 CIDEAO60543 219 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 IGLV2-14P01704 120 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 CYC1P08574 325 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 CFHR2P36980 270 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 LINC00310P59036 64 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 YPEL3P61236 119 aaPredicted RBP7.2□□□□□ -1.26
RTN4-206ENST00000394611 GAGE1Q13065 139 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 SRSF6Q13247 344 aaKnown RBP7.2□□□□□ -1.26
RTN4-206ENST00000394611 KIR3DS1Q14943 382 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 C2orf83Q53S99 150 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 C1orf122Q6ZSJ8 110 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 GTSCR1Q86UQ5 136 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 PRNDQ9UKY0 176 aa7.2□□□□□ -1.26
RTN4-206ENST00000394611 A0A1B0GWB2 263 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 J3QR89 54 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 SPRY2O43597 315 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 APOMO95445 188 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 IGLV3-1P01715 115 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 PSG3Q16557 428 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 TMEM144Q7Z5S9 345 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 Q8TAT8 98 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 SMIM12Q96EX1 92 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 ZNF414Q96IQ9 312 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 HIST1H4GQ99525 98 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 LOC105371242A0A075B767 164 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 TRAV30A0A087WSZ9 112 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 MGST3O14880 152 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 LIPFP07098 398 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 PDLIM4P50479 330 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 SRSF9Q13242 221 aaKnown RBP eCLIP7.19□□□□□ -1.26
RTN4-206ENST00000394611 TMEM178AQ8NBL3 297 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 NEUROG1Q92886 237 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 SLC25A33Q9BSK2 321 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 IFI27L2Q9H2X8 130 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 NKX2-8O15522 239 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 NDUFA3O95167 84 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 IFI27P40305 119 aaPredicted RBP7.19□□□□□ -1.26
RTN4-206ENST00000394611 ETDBQ3ZM63 59 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 OR4F17Q8NGA8 305 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 RASL11BQ9BPW5 248 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 RPP21Q9H633 154 aaKnown RBP7.19□□□□□ -1.26
RTN4-206ENST00000394611 IGLV3-12A0A075B6K2 115 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 TRBV9A0A0B4J1U6 114 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 PPIAL4CA0A0B4J2A2 164 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 IGHV1-24A0A0C4DH33 117 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 MMP23AO75900 390 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 ARMS2P0C7Q2 107 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 PPIAL4GP0DN37 164 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 EMP1P54849 157 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 B3GALT5-AS1P59052 145 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 OR10J3Q5JRS4 329 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 ASCL4Q6XD76 172 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 OR4A5Q8NH83 315 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 TMEM186Q96B77 213 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
RTN4-206ENST00000394611 NOTCH2Q04721 2471 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 WISP2O76076 250 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 SSPNQ14714 243 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 LINC00596Q86U02 117 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 FOXC2Q99958 501 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 Q9H3A6 140 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 C15orf61A6NNL5 157 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 ZNF785A8K8V0 405 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 HTN1P15515 57 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 TNFRSF1AP19438 455 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 BVES-AS1Q5T3Y7 98 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 AMN1Q8IY45 258 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 FER1L6-AS1Q8NA97 138 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 STXBP6Q8NFX7 210 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 GRAMD2BQ96HH9 432 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 SFXN3Q9BWM7 321 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 ONECUT1Q9UBC0 465 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 MSRB2Q9Y3D2 182 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 D6R8Y8 96 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 LYNX1G3V0Z9 82 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 LYNX1P0DP58 116 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 RIGQ13278 110 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 DIAPH2-AS1Q14236 149 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 VMA21Q3ZAQ7 101 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 SPRNQ5BIV9 151 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 VSTM2AQ8TAG5 236 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 JKAMPQ9P055 326 aa7.18□□□□□ -1.26
RTN4-206ENST00000394611 TMEM213A2RRL7 107 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 AAMDCQ9H7C9 122 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 ACACBO00763 2458 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 CCDC168Q8NDH2 2452 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 IL4P05112 153 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 Q0VG73 95 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 PRELID3AQ96N28 172 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 TXNDC17Q9BRA2 123 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 FBXL15Q9H469 300 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 IDI2-AS1Q9NZ38 188 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 SLC25A10Q9UBX3 287 aaPredicted RBP7.17□□□□□ -1.26
RTN4-206ENST00000394611 ABCA2Q9BZC7 2435 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 IGHV2-26A0A0B4J1V2 119 aa7.17□□□□□ -1.26
RTN4-206ENST00000394611 IGLC7A0M8Q6 106 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 272.9 ms