RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 EFCAB1Q9HAE3 211 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 LAMTOR3Q9UHA4 124 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 CELA1Q9UNI1 258 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 CACNA1DQ01668 2161 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 USP9YO00507 2555 aaPredicted RBP4.29□□□□□ -1.72
TRAV35-201ENST00000390462 LRP4O75096 1905 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 DUXBA0A1W2PPF3 345 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 LEUTXA8MZ59 168 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 IGLV1-47P01700 117 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 GABRA2P47869 451 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 RAB13P51153 203 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 RPS11P62280 158 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRAV35-201ENST00000390462 C2orf88Q9BSF0 95 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
TRAV35-201ENST00000390462 SPTBN1Q01082 2364 aaKnown RBP4.29□□□□□ -1.72
TRAV35-201ENST00000390462 MYOFQ9NZM1 2061 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 ICE1Q9Y2F5 2266 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 ITPR2Q14571 2701 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 CABIN1Q9Y6J0 2220 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 A0A0D9SFI3 127 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 A0A1B0GW54 56 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF324O75467 553 aaPredicted RBP4.28□□□□□ -1.72
TRAV35-201ENST00000390462 NRASP01111 189 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 HRASP01112 189 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 KRASP01116 189 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 IGHV1-46P01743 117 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 LPAR6P43657 344 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 LYRM7Q5U5X0 104 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 LRRC28Q86X40 367 aaPredicted RBP4.28□□□□□ -1.72
TRAV35-201ENST00000390462 PACRGLQ8N7B6 248 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 ZFP62Q8NB50 900 aaPredicted RBP4.28□□□□□ -1.72
TRAV35-201ENST00000390462 OR5A1Q8NGJ0 315 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF799Q96GE5 643 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 TM2D3Q9BRN9 247 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 GABARAPL1Q9H0R8 117 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 KLK5Q9Y337 293 aaPredicted RBP4.28□□□□□ -1.72
TRAV35-201ENST00000390462 BOD1L1Q8NFC6 3051 aa4.28□□□□□ -1.72
TRAV35-201ENST00000390462 CITO14578 2027 aa4.28□□□□□ -1.73
TRAV35-201ENST00000390462 IGKV1D-43A0A0B4J1Z2 117 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 TRAV41A0A0B4J266 112 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 I3L521 148 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 CYB5BO43169 146 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 RBFOX2O43251 390 aaKnown RBP eCLIP4.27□□□□□ -1.73
TRAV35-201ENST00000390462 HTR1AP08908 422 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 UBBP0CG47 229 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 MPC1LP0DKB6 136 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 NTF3P20783 257 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 CA5AP35218 305 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 AKR1C2P52895 323 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 DNAJB13P59910 316 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 PSG7Q13046 419 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 PRSS54Q6PEW0 395 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 DAND5Q8N907 189 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 ZNF709Q8N972 641 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 OR13C4Q8NGS5 318 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 C1orf54Q8WWF1 131 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 H1FXQ92522 213 aaKnown RBP4.27□□□□□ -1.73
TRAV35-201ENST00000390462 OR2J1Q9GZK6 312 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 VCXQ9H320 206 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 LHX9Q9NQ69 397 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 TP73-AS1Q9UF72 201 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 LAMTOR2Q9Y2Q5 125 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 KNL1Q8NG31 2342 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 ANAPC1Q9H1A4 1944 aa4.27□□□□□ -1.73
TRAV35-201ENST00000390462 CSMD1Q96PZ7 3565 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 LOC102725191A0A1B0GVB3 256 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 KRTAP29-1A8MX34 341 aaPredicted RBP4.26□□□□□ -1.73
TRAV35-201ENST00000390462 F8W036 122 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 BET1O15155 118 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 IFNA10P01566 189 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 IGKV1-5P01602 117 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 PSG9Q00887 426 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
TRAV35-201ENST00000390462 AMTNQ6UX39 209 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 SSX8Q7RTT4 187 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 KRTAP7-1Q8IUC3 87 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 TSTD1Q8NFU3 115 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 CANT1Q8WVQ1 401 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 PCTPQ9UKL6 214 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 MED31Q9Y3C7 131 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 ZFHX3Q15911 3703 aa4.26□□□□□ -1.73
TRAV35-201ENST00000390462 MYH10P35580 1976 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 LRBAP50851 2863 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 NBASA2RRP1 2371 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 TLN1Q9Y490 2541 aaKnown RBP4.25□□□□□ -1.73
TRAV35-201ENST00000390462 TRBV6-6A0A0A6YYG2 114 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 TRAV38-1A0A0B4J264 116 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 A8MWP4 228 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 PHOX2AO14813 284 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 TRGV3P03979 118 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms