RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 AURKAIP1Q9NWT8 199 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 GAR1Q9NY12 217 aaKnown RBP8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 THYN1Q9P016 225 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 RNF24Q9Y225 148 aa8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 NSD1Q96L73 2696 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-201ENST00000379340 A0A1W2PRD5 423 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 A0A1W2PRF3 423 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 A0A1W2PRM7 423 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 NDUFS8O00217 210 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 PEX7O00628 323 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 TOMM40O96008 361 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 PSG1P11464 419 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 GP9P14770 177 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 ERVFC1-1P60608 527 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 COA6Q5JTJ3 125 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 RUSC1-AS1Q66K80 236 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 C19orf35Q6ZS72 473 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 HIST3H2BBQ8N257 126 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 RBM14Q96PK6 669 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 MDFIQ99750 246 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 PIMREGQ9BSJ6 248 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 CHRDL1Q9BU40 450 aa8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 FN1P02751 2386 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-201ENST00000379340 IGLV11-55A0A075B6I3 123 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 TRBV9A0A0B4J1U6 114 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 IGHV3-21A0A0B4J1V1 117 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 NCBP2LA6PVI3 153 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 IGLV2-8P01709 118 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 IGHV4-39P01824 125 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 HLA-DRB1P01911 266 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 NBEAP1P0C6P0 100 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 HIST1H1BP16401 226 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 HNF1AP20823 631 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 MFAP4P55083 255 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 YPEL3P61236 119 aaPredicted RBP8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 RPL15P61313 204 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 LYZP61626 148 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 CX3CL1P78423 397 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 Q71RC1 249 aaPredicted RBP8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 TMEM183AQ8IXX5 376 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 DYNAPQ8N1N2 210 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 MRPL27Q9P0M9 148 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 V9GYV3 84 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 PLXNB1O43157 2135 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 IGKV1-17P01599 117 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 TMEM183BQ1AE95 376 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 KLK9Q2XQG4 91 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 C5orf17Q8NAS9 161 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 TMEM68Q96MH6 324 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 CCL19Q99731 98 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 SLC25A39Q9BZJ4 359 aaPredicted RBP8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 KLK9Q9UKQ9 250 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 EPDR1Q9UM22 224 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 TRAPPC1Q9Y5R8 145 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 STAB1Q9NY15 2570 aa8.27□□□□□ -1.09
POLR2J3-201ENST00000379340 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 ARHGAP32A7KAX9 2087 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 COL6A5A8TX70 2615 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 NPFFO15130 113 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 GNG7O60262 68 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 SLC25A5P05141 298 aaKnown RBP8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 HIST1H1EP10412 219 aaKnown RBP8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 CD24P25063 80 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 S100A7P31151 101 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 FCGR2BP31994 310 aaPredicted RBP8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 UBE2G1P62253 170 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 CLEC12BQ2HXU8 276 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 DNLZQ5SXM8 178 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 IBA57Q5T440 356 aaKnown RBP8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 ASPHD1Q5U4P2 390 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 Q8N9W7 124 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 FAM168AQ92567 244 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 FMC1Q96HJ9 113 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 TXN2Q99757 166 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 SMR3AQ99954 134 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 ATG101Q9BSB4 218 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 SHANK2-AS3Q9BTD1 123 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 OTORQ9NRC9 128 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 KLF12Q9Y4X4 402 aa8.26□□□□□ -1.09
POLR2J3-201ENST00000379340 WI2-2373I1.2A0A1W2PRP0 233 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 XKRY2A2RUG3 117 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 PGPA6NDG6 321 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 H3BRN7 92 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 MT-ND6P03923 174 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 MGST1P10620 155 aaKnown RBP8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 SAA4P35542 130 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 RANP62826 216 aaKnown RBP8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 PAX8Q06710 450 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 OR5I1Q13606 314 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 WDR73Q6P4I2 378 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 ZNF600Q6ZNG1 722 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 BPIFA4PQ86YQ2 179 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 FAM110DQ8TAY7 271 aaPredicted RBP8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 RNF125Q96EQ8 232 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 AJUBAQ96IF1 538 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms