RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 LEPROTO15243 131 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 C18orf12Q96KH6 178 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 PARP14Q460N5 1801 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 C22orf46C9J442 243 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 EFNB3Q15768 340 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 TEX38Q6PEX7 206 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 Q9HAA7 133 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 LGALS1P09382 135 aaKnown RBP13.42□□□□□ -0.26
RGP1-201ENST00000378078 YPEL1O60688 119 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 GHRHP01286 108 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 SRP19P09132 144 aaKnown RBP13.42□□□□□ -0.26
RGP1-201ENST00000378078 YPEL2Q96QA6 119 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 B4DSR2 109 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 ZNF138P52744 262 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 CTHRC1Q96CG8 243 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 hDV102S1A0JD36 115 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 GAGE6Q13070 117 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 OCC1Q8TAD7 63 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 SPINK13Q1W4C9 94 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 SAMD5Q5TGI4 173 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 RFNGQ9Y644 331 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 ERVH48-1M5A8F1 160 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 RBMY1FQ15415 496 aaKnown RBP13.41□□□□□ -0.26
RGP1-201ENST00000378078 NPDC1Q9NQX5 325 aaPredicted RBP13.41□□□□□ -0.26
RGP1-201ENST00000378078 PRCDQ00LT1 54 aa13.41□□□□□ -0.26
RGP1-201ENST00000378078 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 KMT2EQ8IZD2 1858 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 DSCR9P59020 149 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 ORMDL2Q53FV1 153 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 IGHV1-8P0DP01 117 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 A0A0J9YY99 117 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 TM2D1Q9BX74 207 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 GREM1O60565 184 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 GGTLC1Q9BX51 225 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 CD59P13987 128 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 FAM90A1Q86YD7 464 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 RNF114Q9Y508 228 aa13.4□□□□□ -0.26
RGP1-201ENST00000378078 ATP6V0BQ99437 205 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 DOCK6Q96HP0 2047 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 A8MWV9 139 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 DKK4Q9UBT3 224 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 SAA4P35542 130 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 RNASE13Q5GAN3 156 aaKnown RBP13.39□□□□□ -0.27
RGP1-201ENST00000378078 SCN4AP35499 1836 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 LOC102723996A0A087X1L8 192 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 PRDM13Q9H4Q3 707 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 HEATR1Q9H583 2144 aaKnown RBP13.39□□□□□ -0.27
RGP1-201ENST00000378078 C2orf82Q6UX34 121 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 TMEM144Q7Z5S9 345 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 IGF2BP2-AS1Q96M15 143 aa13.39□□□□□ -0.27
RGP1-201ENST00000378078 TMEM178BH3BS89 294 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 HAPLN4Q86UW8 402 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 RASL10AQ92737 203 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 C5orf30Q96GV9 206 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 IFI27L1Q96BM0 104 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 PSPNO60542 156 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 A0A0A6YYD4 124 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 ZMAT4Q9H898 229 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 hADV29S1A0JD25 119 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 PRIMA1Q86XR5 153 aa13.38□□□□□ -0.27
RGP1-201ENST00000378078 NYNRINQ9P2P1 1898 aaKnown RBP13.38□□□□□ -0.27
RGP1-201ENST00000378078 PMVKQ15126 192 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 RNF166Q96A37 237 aaPredicted RBP13.37□□□□□ -0.27
RGP1-201ENST00000378078 C8orf49Q96NF6 230 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 IGKV1OR2-108A0A075B7D4 117 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 CD177Q8N6Q3 437 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 OVOL3O00110 214 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 TIMP3P35625 211 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 KLF12Q9Y4X4 402 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 ASPHD1Q5U4P2 390 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 Q6AWC8 147 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 WFDC1Q9HC57 220 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 A0A087X0K7 114 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 TRBV7-1A0A0A6YYK4 115 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 AZU1P20160 251 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 MLANAQ16655 118 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 MTURNQ8N3F0 131 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
RGP1-201ENST00000378078 WNK3Q9BYP7 1800 aa13.36□□□□□ -0.27
RGP1-201ENST00000378078 RTTNQ86VV8 2226 aa13.36□□□□□ -0.27
RGP1-201ENST00000378078 DUTP33316 252 aaKnown RBP13.36□□□□□ -0.27
RGP1-201ENST00000378078 H3BMM0 161 aa13.36□□□□□ -0.27
RGP1-201ENST00000378078 BUB1B-PAK6H3BSN5 160 aa13.36□□□□□ -0.27
RGP1-201ENST00000378078 IGFBPL1Q8WX77 278 aa13.36□□□□□ -0.27
RGP1-201ENST00000378078 UBE2WQ96B02 151 aa13.36□□□□□ -0.27
RGP1-201ENST00000378078 DOCK4Q8N1I0 1966 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 WISP3O95389 354 aaPredicted RBP13.35□□□□□ -0.27
RGP1-201ENST00000378078 IGKV1-5P01602 117 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 COL4A5P29400 1685 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 RASL11AQ6T310 242 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 F2Z2F3 143 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 EFNA2O43921 213 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 RS1O15537 224 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 UCP1P25874 307 aa13.35□□□□□ -0.27
RGP1-201ENST00000378078 UBE2BP63146 152 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 TRAV26-2A0A0B4J265 109 aa13.34□□□□□ -0.27
RGP1-201ENST00000378078 A0A1B0GW15 77 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms