RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 LOC389332A0A1B0GUA5 103 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 WT1-ASQ06250 92 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-202ENST00000377797 EML5Q05BV3 1969 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 TNRC6AQ8NDV7 1962 aaKnown RBP11.69□□□□□ -0.54
TCOF1-202ENST00000377797 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 POU2AF1Q16633 256 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 FBXL19-AS1Q494R0 122 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 VN1R17PQ8TDU5 208 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 PRB1P04280 392 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 PRSS1P07477 247 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 PRB4P10163 310 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-202ENST00000377797 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
TCOF1-202ENST00000377797 CD99P14209 185 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 CKS2P33552 79 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 SNRPD3P62318 126 aaKnown RBP11.68□□□□□ -0.54
TCOF1-202ENST00000377797 TBX15Q96SF7 602 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 GSN-AS1Q9NRJ2 163 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 PAX8Q06710 450 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 DUX5Q96PT3 197 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 TEX38Q6PEX7 206 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 OR4X2Q8NGF9 303 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 IMMP2LQ96T52 175 aa11.68□□□□□ -0.54
TCOF1-202ENST00000377797 CDX1P47902 265 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-202ENST00000377797 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
TCOF1-202ENST00000377797 COL4A2P08572 1712 aa11.67□□□□□ -0.54
TCOF1-202ENST00000377797 ITLN2Q8WWU7 325 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-202ENST00000377797 TRBV9A0A0B4J1U6 114 aa11.67□□□□□ -0.54
TCOF1-202ENST00000377797 ZNF418Q8TF45 676 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-202ENST00000377797 HBBP68871 147 aa11.67□□□□□ -0.54
TCOF1-202ENST00000377797 Q6ZPA2 131 aa11.67□□□□□ -0.54
TCOF1-202ENST00000377797 LINC01356Q8N9X3 169 aa11.67□□□□□ -0.54
TCOF1-202ENST00000377797 SRSF8Q9BRL6 282 aaKnown RBP11.67□□□□□ -0.54
TCOF1-202ENST00000377797 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
TCOF1-202ENST00000377797 PHLDA3Q9Y5J5 127 aa11.67□□□□□ -0.54
TCOF1-202ENST00000377797 FOXA3P55318 350 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-202ENST00000377797 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
TCOF1-202ENST00000377797 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
TCOF1-202ENST00000377797 Q1RN00 199 aa11.66□□□□□ -0.54
TCOF1-202ENST00000377797 EXOC3-AS1Q8N2X6 119 aa11.66□□□□□ -0.54
TCOF1-202ENST00000377797 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
TCOF1-202ENST00000377797 IGHV1-69P01742 117 aa11.66□□□□□ -0.54
TCOF1-202ENST00000377797 RPL24P83731 157 aaKnown RBP11.66□□□□□ -0.54
TCOF1-202ENST00000377797 OSTCQ9NRP0 149 aa11.66□□□□□ -0.54
TCOF1-202ENST00000377797 MUC21A0A0G2JKD1 596 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 MUC21A0A140T8X8 626 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 SCGB1C2P0DMR2 95 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 MUC21Q5SSG8 566 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 CIARTQ8N365 385 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-202ENST00000377797 SLC50A1Q9BRV3 221 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 MAP1LC3CQ9BXW4 147 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 PSG8Q9UQ74 426 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 HIGD1CA8MV81 97 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 ZNF329Q86UD4 541 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 TMEM116Q8NCL8 245 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 DYSFO75923 2080 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 TCF21O43680 179 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
TCOF1-202ENST00000377797 SONP18583 2426 aaKnown RBP11.65□□□□□ -0.55
TCOF1-202ENST00000377797 COLCA2A8K830 154 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 IGHV2-5P01817 119 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 DDTP30046 118 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 OR8A1Q8NGG7 326 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 A0A1B0GUT8 65 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 DIRC3C9JPN6 131 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 ZNF726P1Q15940 193 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 TMEM97Q5BJF2 176 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 C8orf31Q8N9H6 132 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
TCOF1-202ENST00000377797 CA1P00915 261 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-202ENST00000377797 RPL13AP40429 203 aaKnown RBP11.64□□□□□ -0.55
TCOF1-202ENST00000377797 NDUFS6O75380 124 aaKnown RBP11.63□□□□□ -0.55
TCOF1-202ENST00000377797 TSPOP30536 169 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 TCF24Q7RTU0 167 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 TCF23Q7RTU1 214 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 C1QL4Q86Z23 238 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 C11orf44Q8N8P7 122 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 HSPB8Q9UJY1 196 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 IGHV3OR16-12A0A075B7B8 117 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 LOC102724200A0A096LPH7 203 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-202ENST00000377797 A0A1W2PRX2 142 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 Q5PR19 223 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 TMEM242Q9NWH2 141 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 CDC42EP3Q9UKI2 254 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 ZFP30Q9Y2G7 519 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 TRANK1O15050 2925 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 DDB2Q92466 427 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 JKAMPQ9P055 326 aa11.63□□□□□ -0.55
TCOF1-202ENST00000377797 CHD3Q12873 2000 aaKnown RBP11.63□□□□□ -0.55
TCOF1-202ENST00000377797 G3V318 75 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 IGLV2-14P01704 120 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 GATA3P23771 443 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 CXCL1P09341 107 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 TRAV9-1A0A075B6T8 112 aa11.62□□□□□ -0.55
TCOF1-202ENST00000377797 CIDEAO60543 219 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms