RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 EAF1Q96JC9 268 aaPredicted RBP9.82□□□□□ -0.84
VRK3-202ENST00000377011 MGAM2Q2M2H8 2515 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 H3BUX3 64 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 TPPP2P59282 170 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 RANP62826 216 aaKnown RBP9.81□□□□□ -0.84
VRK3-202ENST00000377011 OR4P4Q8NGL7 312 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 MISP3Q96FF7 219 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 MS4A10Q96PG2 267 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 NABP2Q9BQ15 211 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 NAGKQ9UJ70 344 aa9.81□□□□□ -0.84
VRK3-202ENST00000377011 IGHV2-26A0A0B4J1V2 119 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 KIR2DL5BA0A0G2JN68 375 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 KIR2DL5BA0A0G2JPC4 375 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 TEX50A0A1B0GTY4 177 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 A0A1W2PRE2 83 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 M0QZK8 103 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 SCGB1D1O95968 90 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 USF2Q15853 346 aaPredicted RBP9.8□□□□□ -0.84
VRK3-202ENST00000377011 TMEM177Q53S58 311 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 C12orf54Q6X4T0 127 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 KIR2DL5AQ8N109 375 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 OR11H6Q8NGC7 330 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 VSTM2AQ8TAG5 236 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 ZNF596Q8TC21 504 aa9.8□□□□□ -0.84
VRK3-202ENST00000377011 A0A1W2PN81 502 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 M0R143 59 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 MT-ND6P03923 174 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 RNASE2P10153 161 aaKnown RBP9.79□□□□□ -0.84
VRK3-202ENST00000377011 LGALS4P56470 323 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 NUTF2P61970 127 aaKnown RBP9.79□□□□□ -0.84
VRK3-202ENST00000377011 ZNF90Q03938 601 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 CD69Q07108 199 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 Q0VG73 95 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 RPEL1Q2QD12 228 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 SPATA31B1PQ5VZV4 182 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 LINC00311Q8N616 119 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 CMTM2Q8TAZ6 248 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 TMEM133Q9H2Q1 129 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 OSTCQ9NRP0 149 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 SIGLEC9Q9Y336 463 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 HILPDAQ9Y5L2 63 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 K7EN84 100 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 SAA1P0DJI8 122 aaPredicted RBP9.79□□□□□ -0.84
VRK3-202ENST00000377011 CD24P25063 80 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 GNG4P50150 75 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 GNG10P50151 68 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 ERHP84090 104 aaKnown RBP9.79□□□□□ -0.84
VRK3-202ENST00000377011 DIAPH2-AS1Q14236 149 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 Q6ZSV7 163 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 MIR17HGQ75NE6 70 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 PDPNQ86YL7 162 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 OR5AN1Q8NGI8 311 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 MEGF9Q9H1U4 602 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 NDUFA4L2Q9NRX3 87 aa9.79□□□□□ -0.84
VRK3-202ENST00000377011 HELTA6NFD8 242 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 C8orf88P0DMB2 117 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 ADMP35318 185 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 PSG5Q15238 335 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 TMEM86BQ8N661 226 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 TMEM167AQ8TBQ9 72 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 NEU1Q99519 415 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 HINT2Q9BX68 163 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 GNB1LQ9BYB4 327 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 COMMD5Q9GZQ3 224 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 AURKAIP1Q9NWT8 199 aaPredicted RBP9.78□□□□□ -0.84
VRK3-202ENST00000377011 VPREB3Q9UKI3 123 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 WNK1Q9H4A3 2382 aa9.78□□□□□ -0.84
VRK3-202ENST00000377011 TET2Q6N021 2002 aaPredicted RBP9.77□□□□□ -0.84
VRK3-202ENST00000377011 H0YJW9 148 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 ISLRO14498 428 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 IGLV1-47P01700 117 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 RBP4P02753 201 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 IGKV1-16P04430 117 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 CRISP2P16562 243 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 RPL8P62917 257 aaKnown RBP9.77□□□□□ -0.85
VRK3-202ENST00000377011 HLA-DRB5Q30154 266 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 TIGITQ495A1 244 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 Q6ZS46 218 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 TMEM219Q86XT9 240 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 V9GYV3 84 aa9.77□□□□□ -0.85
VRK3-202ENST00000377011 SRRM4A7MD48 611 aaKnown RBP9.76□□□□□ -0.85
VRK3-202ENST00000377011 TCAPO15273 167 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 ZNF137PP52743 207 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
VRK3-202ENST00000377011 CENPWQ5EE01 88 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 MMD2Q8IY49 270 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 TMEM256Q8N2U0 113 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 C3orf56Q8N813 242 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 OR4C13Q8NGP0 309 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 OR1L4Q8NGR5 311 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 LINC01006Q8NI28 216 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 SLC25A33Q9BSK2 321 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 CLEC7AQ9BXN2 247 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
VRK3-202ENST00000377011 IGKV1OR2-108A0A075B7D4 117 aa9.76□□□□□ -0.85
VRK3-202ENST00000377011 PSMB11A5LHX3 300 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms