RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 FAM90A27PA6NNH2 459 aa5.41□□□□□ -1.54
UBR4-204ENST00000375254 CD7P09564 240 aa5.41□□□□□ -1.54
UBR4-204ENST00000375254 GFERP55789 205 aa5.41□□□□□ -1.54
UBR4-204ENST00000375254 LINC00527Q9UJ94 153 aa5.41□□□□□ -1.54
UBR4-204ENST00000375254 M0QXV9 152 aa5.41□□□□□ -1.54
UBR4-204ENST00000375254 COX7CP15954 63 aa5.41□□□□□ -1.54
UBR4-204ENST00000375254 CLUHP3Q96NS8 147 aa5.41□□□□□ -1.54
UBR4-204ENST00000375254 FOXS1O43638 330 aa5.4□□□□□ -1.54
UBR4-204ENST00000375254 RHOHQ15669 191 aa5.4□□□□□ -1.54
UBR4-204ENST00000375254 C2orf66Q6UXQ4 117 aa5.4□□□□□ -1.54
UBR4-204ENST00000375254 TRPT1Q86TN4 253 aaKnown RBP5.4□□□□□ -1.54
UBR4-204ENST00000375254 KLF14Q8TD94 323 aaPredicted RBP5.4□□□□□ -1.54
UBR4-204ENST00000375254 IGHV1-69DA0A0B4J2H0 117 aa5.4□□□□□ -1.54
UBR4-204ENST00000375254 SCARF2Q96GP6 870 aaPredicted RBP5.4□□□□□ -1.54
UBR4-204ENST00000375254 DUOX1Q9NRD9 1551 aa5.4□□□□□ -1.54
UBR4-204ENST00000375254 C15orf62A8K5M9 175 aa5.4□□□□□ -1.54
UBR4-204ENST00000375254 SAA1P0DJI8 122 aaPredicted RBP5.4□□□□□ -1.54
UBR4-204ENST00000375254 ALKBH6Q3KRA9 238 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 CCL13Q99616 98 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 NDUFB1O75438 58 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 GATA2P23769 480 aaPredicted RBP5.4□□□□□ -1.55
UBR4-204ENST00000375254 TMEM240Q5SV17 173 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 FAM219BQ5XKK7 198 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 Q8N1Y9 231 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 LINC00312Q9Y6C7 94 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 F8WEM9 126 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 NTN3O00634 580 aaPredicted RBP5.4□□□□□ -1.55
UBR4-204ENST00000375254 SH2D1AO60880 128 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 PCP2Q8IVA1 136 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 CCL4L1Q8NHW4 92 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 UCN2Q96RP3 112 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 IGLV3-21P80748 117 aaPredicted RBP5.4□□□□□ -1.55
UBR4-204ENST00000375254 TOMM7Q9P0U1 55 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 CENPVL1A0A0U1RR11 272 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 DAD1P61803 113 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 IGKV1-9A0A0C4DH69 117 aa5.4□□□□□ -1.55
UBR4-204ENST00000375254 PIK3C2BO00750 1634 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 MRPL35Q9NZE8 188 aaKnown RBP5.39□□□□□ -1.55
UBR4-204ENST00000375254 ZFP2Q6ZN57 461 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 TRAV3A0A0B4J244 114 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 RFNGQ9Y644 331 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 NAV3Q8IVL0 2385 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 IGHV5-51A0A0C4DH38 117 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 ERCC8Q13216 396 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 CRIPAKQ8N1N5 446 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 IGKV1D-13A0A0B4J2D9 117 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 IGKV1-13P0DP09 117 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 NUP205Q92621 2012 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 LSM4Q9Y4Z0 139 aaKnown RBP5.39□□□□□ -1.55
UBR4-204ENST00000375254 WBP1Q96G27 269 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 TET3O43151 1660 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 TRAV12-2A0A075B6T6 113 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 CHCHD5Q9BSY4 110 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 UBE2AP49459 152 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 TMEM196Q5HYL7 178 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 PKIGQ9Y2B9 76 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 FUSP35637 526 aaKnown RBP eCLIP5.39□□□□□ -1.552e-7■■□□□ 12.3
UBR4-204ENST00000375254 NBL1P41271 181 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 VWC2Q2TAL6 325 aa5.39□□□□□ -1.55
UBR4-204ENST00000375254 PREX2Q70Z35 1606 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 I3L3M4 83 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 Q6P435 159 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 MYH13Q9UKX3 1938 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 IGHV3-21A0A0B4J1V1 117 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 CDPF1Q6NVV7 123 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 IQGAP1P46940 1657 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 K7EM74 188 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 KLK10O43240 276 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 IGKV3-11P04433 115 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 LINC01587Q99440 93 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 ELANEP08246 267 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 P0DMU3 169 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 FAM231AP0DMU4 169 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 FAM231CP0DMU5 169 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 RPL36AP83881 106 aaKnown RBP5.38□□□□□ -1.55
UBR4-204ENST00000375254 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 RPL36ALQ969Q0 106 aaKnown RBP5.38□□□□□ -1.55
UBR4-204ENST00000375254 SETD1BQ9UPS6 1966 aaKnown RBP5.38□□□□□ -1.55
UBR4-204ENST00000375254 TRBV7-1A0A0A6YYK4 115 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 LGALS9O00182 355 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 ZNF876PQ49A33 203 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 CRLF1O75462 422 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 KIF1AQ12756 1690 aa5.38□□□□□ -1.55
UBR4-204ENST00000375254 UNQ6494/PRO21346Q6UXR6 183 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 OTOGLQ3ZCN5 2332 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 RPL39P5Q59GN2 51 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 ZNF474Q6S9Z5 364 aaPredicted RBP5.37□□□□□ -1.55
UBR4-204ENST00000375254 PRORYQ9H606 182 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 IGKV1-8A0A0C4DH67 115 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 LTAP01374 205 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 SHANK2-AS3Q9BTD1 123 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 DKK2Q9UBU2 259 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 CACNA1HO95180 2353 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 PMS2P5A8MQ11 134 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 IGKV1-5P01602 117 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 PPIFP30405 207 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms