RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 GATA2P23769 480 aaPredicted RBP12.84□□□□□ -0.35
PCDH19-202ENST00000373034 AGMATQ9BSE5 352 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 PRSS22Q9GZN4 317 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 hDV102S1A0JD36 115 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
PCDH19-202ENST00000373034 IMMP1LQ96LU5 166 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 SHANK3Q9BYB0 1731 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 CEACAM1P13688 526 aa12.84□□□□□ -0.35
PCDH19-202ENST00000373034 BSPH1Q075Z2 132 aa12.83□□□□□ -0.35
PCDH19-202ENST00000373034 MPV17L2Q567V2 206 aa12.83□□□□□ -0.35
PCDH19-202ENST00000373034 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.83□□□□□ -0.35
PCDH19-202ENST00000373034 LINC01590Q5TEZ4 76 aa12.83□□□□□ -0.35
PCDH19-202ENST00000373034 PRIMA1Q86XR5 153 aa12.83□□□□□ -0.35
PCDH19-202ENST00000373034 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.35
PCDH19-202ENST00000373034 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 PCOLCEQ15113 449 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 A0A1W2PRX2 142 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 PRCDQ00LT1 54 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 PLXNB3Q9ULL4 1909 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 IGFBP3P17936 291 aaPredicted RBP12.83□□□□□ -0.36
PCDH19-202ENST00000373034 NRTNQ99748 197 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 ANAPC1Q9H1A4 1944 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 TRBV6-7A0A0A0MS04 114 aa12.83□□□□□ -0.36
PCDH19-202ENST00000373034 CELA2AP08217 269 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 MPZP25189 248 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 C9orf50Q5SZB4 431 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 WISP3O95389 354 aaPredicted RBP12.82□□□□□ -0.36
PCDH19-202ENST00000373034 IGHG3P01860 377 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 COX6A1P12074 109 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 CEACAM8P31997 349 aaPredicted RBP12.82□□□□□ -0.36
PCDH19-202ENST00000373034 PYYP10082 97 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 TMEM126AQ9H061 195 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 IGHV3OR16-8A0A075B7F1 116 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 SRSF3P84103 164 aaKnown RBP12.82□□□□□ -0.36
PCDH19-202ENST00000373034 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 LINC00271P0C7V0 271 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 MORN2Q502X0 79 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 ZNF114Q8NC26 417 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 LSM4Q9Y4Z0 139 aaKnown RBP12.82□□□□□ -0.36
PCDH19-202ENST00000373034 A0A1B0GTI1 187 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 NUP35Q8NFH5 326 aa12.82□□□□□ -0.36
PCDH19-202ENST00000373034 ZNF876PQ49A33 203 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 GVINP1Q7Z2Y8 2422 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 LINC00477Q96M19 166 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 CD55P08174 381 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 LOC102723996A0A087X1L8 192 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 PPIFP30405 207 aaKnown RBP12.81□□□□□ -0.36
PCDH19-202ENST00000373034 NAA38Q9BRA0 125 aaKnown RBP12.81□□□□□ -0.36
PCDH19-202ENST00000373034 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 DEPPQ9NTK1 212 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 LY6G5BQ8NDX9 201 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 NABP1Q96AH0 204 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 C7orf69Q9H7B7 122 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 SMAD7O15105 426 aaKnown RBP12.81□□□□□ -0.36
PCDH19-202ENST00000373034 TRBV7-1A0A0A6YYK4 115 aa12.81□□□□□ -0.36
PCDH19-202ENST00000373034 LY96Q9Y6Y9 160 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 C1QL2Q7Z5L3 287 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 MMP23AO75900 390 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 ZNF138P52744 262 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 RBM3P98179 157 aaKnown RBP12.8□□□□□ -0.36
PCDH19-202ENST00000373034 SRSF7Q16629 238 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDH19-202ENST00000373034 TMEM133Q9H2Q1 129 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 SIPA1L1O43166 1804 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 PRR19A6NJB7 356 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 REPIN1Q9BWE0 567 aaKnown RBP12.8□□□□□ -0.36
PCDH19-202ENST00000373034 POU2AF1Q16633 256 aa12.8□□□□□ -0.36
PCDH19-202ENST00000373034 CXCL1P09341 107 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 R3HDMLQ9H3Y0 253 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 GFRA4Q9GZZ7 299 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 IGHV3-11P01762 117 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 DMRTC2Q8IXT2 367 aaPredicted RBP12.79□□□□□ -0.36
PCDH19-202ENST00000373034 SMRP1Q8NCR6 262 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 FGF16O43320 207 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 SCRT1Q9BWW7 348 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 RPUSD1Q9UJJ7 312 aaKnown RBP12.79□□□□□ -0.36
PCDH19-202ENST00000373034 COLCA2A8K830 154 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 SPAARA0A1B0GVQ0 90 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 TICRRQ7Z2Z1 1910 aa12.79□□□□□ -0.36
PCDH19-202ENST00000373034 GAGE12JA6NER3 117 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 GAGE1Q13065 139 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 GAGE4Q13068 117 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 GAGE5Q13069 117 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 GAGE6Q13070 117 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 SPSB3Q6PJ21 355 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 SLC22A18ASQ8N1D0 253 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 LYPD1Q8N2G4 141 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 C1orf43Q9BWL3 253 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 CECR9P0C854 216 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 TMEM158Q8WZ71 300 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 IGHV2OR16-5A0A0B4J2B6 119 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 CTHRC1Q96CG8 243 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 SPXQ9BT56 116 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
PCDH19-202ENST00000373034 TRGV1A0A0A0MS02 117 aa12.78□□□□□ -0.36
PCDH19-202ENST00000373034 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms