RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 HIST3H2BBQ8N257 126 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 AGMATQ9BSE5 352 aa9.46□□□□□ -0.9
VCL-202ENST00000372755 SSBP2P81877 361 aaPredicted RBP9.45□□□□□ -0.9
VCL-202ENST00000372755 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 LHFPL1Q86WI0 220 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 RIPPLY3P57055 190 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 CSTL1Q9H114 145 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 INS-IGF2F8WCM5 200 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 FCN3O75636 299 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 IGHV3-53P01767 116 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 C2orf82Q6UX34 121 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 GFI1Q99684 422 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 RNF114Q9Y508 228 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 BUB1B-PAK6H3BSN5 160 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 LCN12Q6JVE5 192 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 A0A087WV48 116 aa9.45□□□□□ -0.9
VCL-202ENST00000372755 SLC25A16P16260 332 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 KLF12Q9Y4X4 402 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 RFNGQ9Y644 331 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 GUSBP1Q15486 140 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 TMEM14EPQ6UXP3 125 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 TUBGCP6Q96RT7 1819 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 TMEM249Q2WGJ8 235 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 C1orf159Q96HA4 380 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 ATAD5Q96QE3 1844 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 PRTN3P24158 256 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 CRIM1Q9NZV1 1036 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 TRBV6-6A0A0A6YYG2 114 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 NDPQ00604 133 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
VCL-202ENST00000372755 AMBPP02760 352 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 CXCL1P09341 107 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 SELLP14151 372 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 SUPT4H1P63272 117 aaKnown RBP9.43□□□□□ -0.9
VCL-202ENST00000372755 Q5PR19 223 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 DLX4Q92988 240 aaPredicted RBP9.43□□□□□ -0.9
VCL-202ENST00000372755 ANAPC10Q9UM13 185 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 UNC13CQ8NB66 2214 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 SRSF8Q9BRL6 282 aaKnown RBP9.43□□□□□ -0.9
VCL-202ENST00000372755 TIMM21Q9BVV7 248 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 PSPNO60542 156 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 FXYD7P58549 80 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 LY6G5BQ8NDX9 201 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 IGKV1-27A0A075B6S5 117 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 TNFRSF6BO95407 300 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 LCNL1Q6ZST4 164 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 NMSQ5H8A3 153 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 LINC01356Q8N9X3 169 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 SELENOKQ9Y6D0 94 aa9.43□□□□□ -0.9
VCL-202ENST00000372755 BRD3OSQ6XYD6 125 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 C14orf178Q8N769 122 aaPredicted RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 MRPL27Q9P0M9 148 aaKnown RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 IGKV1-5P01602 117 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 RPL32P62910 135 aaKnown RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 ZNF48Q96MX3 618 aaPredicted RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 RHPN1-AS1Q9BWJ2 59 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 SIGLEC9Q9Y336 463 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 EFNA2O43921 213 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 GNLYP22749 145 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 FOXG1P55316 489 aaPredicted RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 CYTL1Q9NRR1 136 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 DMRTC2Q8IXT2 367 aaPredicted RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 TMEM158Q8WZ71 300 aa9.42□□□□□ -0.9
VCL-202ENST00000372755 COL5A3P25940 1745 aaPredicted RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 TPRP12270 2363 aaKnown RBP9.42□□□□□ -0.9
VCL-202ENST00000372755 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 Q8TAT8 98 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 FNDC10F2Z333 226 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
VCL-202ENST00000372755 PRIMA1Q86XR5 153 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 DAZ1Q9NQZ3 744 aaKnown RBP9.41□□□□□ -0.9
VCL-202ENST00000372755 COL11A2P13942 1736 aaPredicted RBP9.41□□□□□ -0.9
VCL-202ENST00000372755 CEACAM8P31997 349 aaPredicted RBP9.41□□□□□ -0.9
VCL-202ENST00000372755 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 OCIAD2Q56VL3 154 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
VCL-202ENST00000372755 A0A0G2JNJ9 132 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 COLCA2A8K830 154 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 GLRX5Q86SX6 157 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
VCL-202ENST00000372755 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 Q9UFV3 132 aa9.41□□□□□ -0.9
VCL-202ENST00000372755 ANKRD36A6QL64 1941 aa9.4□□□□□ -0.9
VCL-202ENST00000372755 TRAV8-1A0A0A6YYK1 113 aa9.4□□□□□ -0.9
VCL-202ENST00000372755 ZNF329Q86UD4 541 aa9.4□□□□□ -0.9
VCL-202ENST00000372755 RBBP6Q7Z6E9 1792 aaKnown RBP9.4□□□□□ -0.9
VCL-202ENST00000372755 MBD3L4A6NDZ8 208 aaPredicted RBP9.4□□□□□ -0.9
VCL-202ENST00000372755 MBD3L3A6NE82 208 aaPredicted RBP9.4□□□□□ -0.9
VCL-202ENST00000372755 MBD3L5A6NJ08 208 aaPredicted RBP9.4□□□□□ -0.9
VCL-202ENST00000372755 HAPLN4Q86UW8 402 aa9.4□□□□□ -0.9
VCL-202ENST00000372755 MBD3L2Q8NHZ7 208 aaPredicted RBP9.4□□□□□ -0.9
VCL-202ENST00000372755 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.91
VCL-202ENST00000372755 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.91
VCL-202ENST00000372755 LIME1Q9H400 295 aa9.4□□□□□ -0.91
VCL-202ENST00000372755 MST1P26927 711 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms