RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 MEGF9Q9H1U4 602 aa9.4□□□□□ -0.91
PTPRF-203ENST00000372407 DOCK11Q5JSL3 2073 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 CD177Q8N6Q3 437 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 TRGV2A0A075B6R0 118 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 TCRAP04437 139 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 GZMBP10144 247 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 ZNF672Q499Z4 452 aaPredicted RBP9.39□□□□□ -0.91
PTPRF-203ENST00000372407 C5orf24Q7Z6I8 188 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 RNF5Q99942 180 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 DOCK9Q9BZ29 2069 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 ACACBO00763 2458 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 FAM208BQ5VWN6 2430 aa9.39□□□□□ -0.91
PTPRF-203ENST00000372407 IGHV2-26A0A0B4J1V2 119 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 IGHV1-8P0DP01 117 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 Q6P435 159 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 TMEM256Q8N2U0 113 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 NUP37Q8NFH4 326 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 TRGV9Q99603 122 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 PEMTQ9UBM1 199 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 SLC25A15Q9Y619 301 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 TRBV7-9A0A0J9YWB2 115 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 NTF4P34130 210 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 PAX8Q06710 450 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 PRSS22Q9GZN4 317 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 FNDC4Q9H6D8 234 aaPredicted RBP9.38□□□□□ -0.91
PTPRF-203ENST00000372407 SPG11Q96JI7 2443 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 TRAV3A0A0B4J244 114 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 LINC00473A8K010 186 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 OVOL1O14753 267 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 MLNRO43193 412 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 PLAURQ03405 335 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 HSD52Q0P140 79 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 ASCL4Q6XD76 172 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 OR5A1Q8NGJ0 315 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 MBNL3Q9NUK0 354 aaKnown RBP9.38□□□□□ -0.91
PTPRF-203ENST00000372407 SMPXQ9UHP9 88 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 METRNQ9UJH8 293 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 PLNP26678 52 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 SFTA2Q6UW10 78 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 Q6ZRM9 215 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 FOXL2NBQ6ZUU3 175 aa9.38□□□□□ -0.91
PTPRF-203ENST00000372407 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
PTPRF-203ENST00000372407 C15orf62A8K5M9 175 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 IGKCP01834 107 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 NOTCH2Q04721 2471 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 FHL1Q13642 323 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 LDLRAD2Q5SZI1 272 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 EXOC3-AS1Q8N2X6 119 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 BEND2Q8NDZ0 799 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 OR9G4Q8NGQ1 327 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 SCRT1Q9BWW7 348 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 A0A0G2JRQ6 117 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 OOSP1A8MZH6 123 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 CFPP27918 469 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 TMEM178BH3BS89 294 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 LILRA1O75019 489 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 MALRD1Q5VYJ5 2156 aa9.37□□□□□ -0.91
PTPRF-203ENST00000372407 EVI2AP22794 236 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 RNF182Q8N6D2 247 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 ZNF581Q9P0T4 197 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 TSC2P49815 1807 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 TMEM8BA6NDV4 472 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 Q0VFX4 171 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 C15orf32Q32M92 178 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 SLC25A2Q9BXI2 301 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 IGHV1-3A0A0C4DH29 117 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 WNT2P09544 360 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 B3GALT5-AS1P59052 145 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 FAM90A2PQ658T7 463 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 ZNF479Q96JC4 524 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 TRAV8-2A0A0B4J237 113 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 ERVK11-1P61568 191 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 KIR3DL3Q8N743 410 aa9.36□□□□□ -0.91
PTPRF-203ENST00000372407 SMAD7O15105 426 aaKnown RBP9.35□□□□□ -0.91
PTPRF-203ENST00000372407 HOXA3O43365 443 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-203ENST00000372407 ZNF124Q15973 351 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 MDS2Q8NDY4 140 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 CHTOPQ9Y3Y2 248 aaKnown RBP9.35□□□□□ -0.91
PTPRF-203ENST00000372407 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 ACTL10Q5JWF8 245 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 LTBP2Q14767 1821 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 BMPERQ8N8U9 685 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 HEATR5AQ86XA9 2040 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 TRAV41A0A0B4J266 112 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 H0YJW9 148 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 TDGF1P13385 188 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 SPSB3Q6PJ21 355 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 LINC00527Q9UJ94 153 aa9.35□□□□□ -0.91
PTPRF-203ENST00000372407 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
PTPRF-203ENST00000372407 D6R8Y8 96 aa9.34□□□□□ -0.91
PTPRF-203ENST00000372407 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
PTPRF-203ENST00000372407 MINOS1Q5TGZ0 78 aa9.34□□□□□ -0.91
PTPRF-203ENST00000372407 SIGLEC15Q6ZMC9 328 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms