RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CFHR2P36980 270 aa9.32□□□□□ -0.92
SMARCA1-201ENST00000371121 C10orf55Q5SWW7 151 aa9.32□□□□□ -0.92
SMARCA1-201ENST00000371121 TMEM105Q8N8V8 129 aa9.32□□□□□ -0.92
SMARCA1-201ENST00000371121 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
SMARCA1-201ENST00000371121 DPF1Q92782 380 aa9.32□□□□□ -0.92
SMARCA1-201ENST00000371121 GUCD1Q96NT3 240 aa9.32□□□□□ -0.92
SMARCA1-201ENST00000371121 JKAMPQ9P055 326 aa9.32□□□□□ -0.92
SMARCA1-201ENST00000371121 ASH1LQ9NR48 2969 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 SRRM5B3KS81 715 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 K7ERJ3 54 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 SMAD7O15105 426 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 FXYD2P54710 66 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 NHLH1Q02575 133 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 TIMM8BQ9Y5J9 83 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 PGPA6NDG6 321 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 NDUFS8O00217 210 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 APOA2P02652 100 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 KIR2DS2P43631 304 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 C10orf113Q5VZT2 155 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 GTF2H5Q6ZYL4 71 aa9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 BOKQ9UMX3 212 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-201ENST00000371121 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 FAM222BQ8WU58 562 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 NPIPB3Q92617 1050 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 HSPB8Q9UJY1 196 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 PRNDQ9UKY0 176 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 SPCS1Q9Y6A9 102 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 LRBAP50851 2863 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 TCRBV4S1A1TA0A5B7 111 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 TM4SF20Q53R12 229 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 DUSP23Q9BVJ7 150 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 TCRAP04437 139 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 INSL3P51460 131 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 SMAGPQ0VAQ4 97 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 THAP8Q8NA92 274 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 MGAQ8IWI9 3026 aa9.3□□□□□ -0.92
SMARCA1-201ENST00000371121 A8MWL6 223 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 LHBP01229 141 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 TMEM108Q6UXF1 575 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 FOXI2Q6ZQN5 318 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 VPS13CQ709C8 3753 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 P01737 135 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 DIAPH2-AS1Q14236 149 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 Q86TA4 180 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 RITA1Q96K30 269 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 AP5S1Q9NUS5 200 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 SIGLEC8Q9NYZ4 499 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 SOX21Q9Y651 276 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 HEATR1Q9H583 2144 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 SLC25A5P05141 298 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 FABP6P51161 128 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 DKK2Q9UBU2 259 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
SMARCA1-201ENST00000371121 HSD52Q0P140 79 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 RND1Q92730 232 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 ENY2Q9NPA8 101 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 ZNF71Q9NQZ8 489 aaPredicted RBP9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 KBTBD11-OT1A0A1B0GTJ5 212 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 A0A1W2PNU3 283 aaPredicted RBP9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 COX7A2P2O60397 106 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 CACNG7P62955 275 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 WFDC2Q14508 124 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 Q5PR19 223 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 TSSC4Q9Y5U2 329 aaPredicted RBP9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 U3KQK5 164 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 GAS8-AS1O95177 125 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 PSG3Q16557 428 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 FAM162BQ5T6X4 162 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 CACNG8Q8WXS5 425 aa9.28□□□□□ -0.92
SMARCA1-201ENST00000371121 CECR9P0C854 216 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 LGALS9BQ3B8N2 356 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 LGALS9CQ6DKI2 356 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 FMC1Q96HJ9 113 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 SPATA25Q9BR10 227 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 SPRY4Q9C004 299 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 INS-IGF2F8WCM5 200 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 IGLV2-23P01705 113 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 FHL3Q13643 280 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 TIMM23BQ5SRD1 257 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 NANOS1Q8WY41 292 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 Q9H3A6 140 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 PRO0461Q9UI25 63 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 SIVA1O15304 175 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 PLP1P60201 277 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 SLC25A48Q6ZT89 311 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 PDPNQ86YL7 162 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 ZCCHC24Q8N2G6 241 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 EXOC3-AS1Q8N2X6 119 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 OR5AN1Q8NGI8 311 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 OR5A1Q8NGJ0 315 aa9.27□□□□□ -0.93
SMARCA1-201ENST00000371121 A6NDN8 102 aa9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 BMI1P35226 326 aa9.26□□□□□ -0.93
SMARCA1-201ENST00000371121 LINC00574Q9H8X3 128 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms