RNA–Protein interactions for RNA: ENST00000366687.5

CCSAP-203, Transcript of centriole, cilia and spindle associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSAP, Length 5,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSAP-203ENST00000366687 SRSF6Q13247 344 aaKnown RBP16.59■□□□□ 0.25
CCSAP-203ENST00000366687 CLDN16Q9Y5I7 305 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 H3BUX3 64 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 NIT1Q86X76 327 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 C11orf44Q8N8P7 122 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 NDUFAF3Q9BU61 184 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 RPL15P61313 204 aaKnown RBP16.59■□□□□ 0.25
CCSAP-203ENST00000366687 HGFACQ04756 655 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 FHL1Q13642 323 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 C5orf24Q7Z6I8 188 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 EXOC3-AS1Q8N2X6 119 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 SPCS1Q9Y6A9 102 aa16.59■□□□□ 0.25
CCSAP-203ENST00000366687 ETV2O00321 342 aaPredicted RBP16.58■□□□□ 0.25
CCSAP-203ENST00000366687 GNLYP22749 145 aa16.58■□□□□ 0.25
CCSAP-203ENST00000366687 KIR3DL3Q8N743 410 aa16.58■□□□□ 0.25
CCSAP-203ENST00000366687 TRBV7-9A0A0J9YWB2 115 aa16.58■□□□□ 0.24
CCSAP-203ENST00000366687 CMC4P56277 68 aaPredicted RBP16.58■□□□□ 0.24
CCSAP-203ENST00000366687 KLF17Q5JT82 389 aaPredicted RBP16.58■□□□□ 0.24
CCSAP-203ENST00000366687 C9orf139Q6ZV77 190 aa16.58■□□□□ 0.24
CCSAP-203ENST00000366687 IFI27L1Q96BM0 104 aa16.58■□□□□ 0.24
CCSAP-203ENST00000366687 TRGV4A0A0C4DH28 118 aa16.58■□□□□ 0.24
CCSAP-203ENST00000366687 C5orf30Q96GV9 206 aa16.58■□□□□ 0.24
CCSAP-203ENST00000366687 SRD5A1P18405 259 aa16.57■□□□□ 0.24
CCSAP-203ENST00000366687 SHANK1Q9Y566 2161 aa16.57■□□□□ 0.24
CCSAP-203ENST00000366687 LOC105371267A0A1B0GV96 52 aa16.57■□□□□ 0.24
CCSAP-203ENST00000366687 ANK1P16157 1881 aa16.57■□□□□ 0.24
CCSAP-203ENST00000366687 SRSF4Q08170 494 aaKnown RBP16.57■□□□□ 0.24
CCSAP-203ENST00000366687 GFI1BQ5VTD9 330 aa16.57■□□□□ 0.24
CCSAP-203ENST00000366687 NTF4P34130 210 aa16.57■□□□□ 0.24
CCSAP-203ENST00000366687 IGKV2-40A0A087WW87 121 aaPredicted RBP16.56■□□□□ 0.24
CCSAP-203ENST00000366687 COLCA2A8K830 154 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 IGKV2D-40P01614 121 aaPredicted RBP16.56■□□□□ 0.24
CCSAP-203ENST00000366687 UNQ6494/PRO21346Q6UXR6 183 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 ZNF581Q9P0T4 197 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 ARFGEF3Q5TH69 2177 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 HIST1H2BLQ99880 126 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 TRBV7-1A0A0A6YYK4 115 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 C15orf62A8K5M9 175 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 UBE2CO00762 179 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 ZNF138P52744 262 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 LINC01559Q495D7 138 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 ARTNQ5T4W7 220 aa16.56■□□□□ 0.24
CCSAP-203ENST00000366687 ITGB1BP1O14713 200 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 TMEM155Q4W5P6 130 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 LY96Q9Y6Y9 160 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 TCF20Q9UGU0 1960 aaKnown RBP16.55■□□□□ 0.24
CCSAP-203ENST00000366687 BRD3OSQ6XYD6 125 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 LHFPL4Q7Z7J7 247 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 RBMY1BA6NDE4 496 aaKnown RBP16.55■□□□□ 0.24
CCSAP-203ENST00000366687 RBMY1EA6NEQ0 496 aaKnown RBP16.55■□□□□ 0.24
CCSAP-203ENST00000366687 RBMY1DP0C7P1 496 aaKnown RBP16.55■□□□□ 0.24
CCSAP-203ENST00000366687 RBMY1A1P0DJD3 496 aaKnown RBP16.55■□□□□ 0.24
CCSAP-203ENST00000366687 RBMY1CP0DJD4 496 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 EVI2AP22794 236 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 PRTN3P24158 256 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 RASL11AQ6T310 242 aa16.55■□□□□ 0.24
CCSAP-203ENST00000366687 CXCL1P09341 107 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 RNF182Q8N6D2 247 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 MSRB2Q9Y3D2 182 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 CFPP27918 469 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 USMG5Q96IX5 58 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 GBF1Q92538 1859 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 VWA8A3KMH1 1905 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 LYPD1Q8N2G4 141 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 DERL1Q9BUN8 251 aa16.54■□□□□ 0.24
CCSAP-203ENST00000366687 FNDC10F2Z333 226 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 GZMBP10144 247 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 CD28P10747 220 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 GTSCR1Q86UQ5 136 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 COL8A2P25067 703 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 MALP21145 153 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 LYPD2Q6UXB3 125 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 Q6ZRM9 215 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 NHP2Q9NX24 153 aaKnown RBP16.53■□□□□ 0.24
CCSAP-203ENST00000366687 A0A0G2JRQ6 117 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 RNASE2P10153 161 aaKnown RBP16.53■□□□□ 0.24
CCSAP-203ENST00000366687 PLNP26678 52 aa16.53■□□□□ 0.24
CCSAP-203ENST00000366687 TYMSP04818 313 aa16.52■□□□□ 0.24
CCSAP-203ENST00000366687 ZNF688P0C7X2 276 aa16.52■□□□□ 0.24
CCSAP-203ENST00000366687 GLRX5Q86SX6 157 aa16.52■□□□□ 0.24
CCSAP-203ENST00000366687 SMPXQ9UHP9 88 aa16.52■□□□□ 0.24
CCSAP-203ENST00000366687 GHRHP01286 108 aa16.52■□□□□ 0.24
CCSAP-203ENST00000366687 IGKV3D-20A0A0C4DH25 116 aa16.52■□□□□ 0.23
CCSAP-203ENST00000366687 LINC00205P59089 165 aa16.52■□□□□ 0.23
CCSAP-203ENST00000366687 SRSF8Q9BRL6 282 aaKnown RBP16.52■□□□□ 0.23
CCSAP-203ENST00000366687 CHTOPQ9Y3Y2 248 aaKnown RBP16.52■□□□□ 0.23
CCSAP-203ENST00000366687 SBF1O95248 1867 aa16.52■□□□□ 0.23
CCSAP-203ENST00000366687 SRRM4A7MD48 611 aaKnown RBP16.52■□□□□ 0.23
CCSAP-203ENST00000366687 LYL1P12980 280 aa16.52■□□□□ 0.23
CCSAP-203ENST00000366687 MTURNQ8N3F0 131 aa16.52■□□□□ 0.23
CCSAP-203ENST00000366687 WFDC12Q8WWY7 111 aa16.52■□□□□ 0.23
CCSAP-203ENST00000366687 E7EQL1 145 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 H3BUT2 72 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 LINC00477Q96M19 166 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 IGKCP01834 107 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 DMRTA1Q5VZB9 504 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 HIST3H2BBQ8N257 126 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 RFNGQ9Y644 331 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 LINC00587B1AMM8 73 aa16.51■□□□□ 0.23
CCSAP-203ENST00000366687 CHCHD5Q9BSY4 110 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms