RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PF4V1P10720 104 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
SMC5-201ENST00000361138 PSG3Q16557 428 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 NCOR1P1Q9H4R4 102 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 RPUSD1Q9UJJ7 312 aaKnown RBP11.41□□□□□ -0.58
SMC5-201ENST00000361138 PYGO2Q9BRQ0 406 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 CACNA1IQ9P0X4 2223 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
SMC5-201ENST00000361138 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 B9A039 149 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 SH2D1AO60880 128 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
SMC5-201ENST00000361138 RNASE2P10153 161 aaKnown RBP11.41□□□□□ -0.58
SMC5-201ENST00000361138 Q86TA4 180 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 IGHV3OR16-8A0A075B7F1 116 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 TMEM133Q9H2Q1 129 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 TCF20Q9UGU0 1960 aaKnown RBP11.4□□□□□ -0.58
SMC5-201ENST00000361138 C17orf100A8MU93 164 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 SLC50A1Q9BRV3 221 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 ZNF492Q9P255 531 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 K7EN84 100 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 NBR2O15453 112 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 RNFT1Q5M7Z0 435 aa11.4□□□□□ -0.58
SMC5-201ENST00000361138 MDC1Q14676 2089 aaKnown RBP11.4□□□□□ -0.58
SMC5-201ENST00000361138 NPIPB5A8MRT5 1133 aa11.4□□□□□ -0.59
SMC5-201ENST00000361138 K7EP34 96 aa11.4□□□□□ -0.59
SMC5-201ENST00000361138 H0YJW9 148 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 PLNP26678 52 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 COLCA1Q6ZS62 124 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 TMEM167AQ8TBQ9 72 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 NPFFO15130 113 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 PAX1P15863 534 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 VDAC2P45880 294 aaPredicted RBP11.39□□□□□ -0.59
SMC5-201ENST00000361138 BVES-AS1Q5T3Y7 98 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 BSPH1Q075Z2 132 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 MLANAQ16655 118 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 MRAP2Q96G30 205 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 JMJD8Q96S16 334 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 IGLC7A0M8Q6 106 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 Q0VFX4 171 aa11.39□□□□□ -0.59
SMC5-201ENST00000361138 RSPO1Q2MKA7 263 aaPredicted RBP11.39□□□□□ -0.59
SMC5-201ENST00000361138 APOBEC3AP31941 199 aaPredicted RBP11.38□□□□□ -0.59
SMC5-201ENST00000361138 CLEC19AQ6UXS0 136 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 COX8AP10176 69 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 ZFP36L1Q07352 338 aaKnown RBP11.38□□□□□ -0.59
SMC5-201ENST00000361138 DLX4Q92988 240 aaPredicted RBP11.38□□□□□ -0.59
SMC5-201ENST00000361138 K7EP13 123 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 CCL25O15444 150 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 CD24P25063 80 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 TMPRSS3P57727 454 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 CT83Q5H943 113 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 LSM4Q9Y4Z0 139 aaKnown RBP11.38□□□□□ -0.59
SMC5-201ENST00000361138 DENND4AQ7Z401 1863 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 IGHV1-46P01743 117 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 FAM231DQ6ZW35 169 aa11.38□□□□□ -0.59
SMC5-201ENST00000361138 IGKV1D-17A0A075B6S4 117 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 GGTLC3B5MD39 225 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 PRB3Q04118 309 aaPredicted RBP11.37□□□□□ -0.59
SMC5-201ENST00000361138 DYNLRB2Q8TF09 96 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 C11orf52Q96A22 123 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 HELZP42694 1942 aaKnown RBP11.37□□□□□ -0.59
SMC5-201ENST00000361138 RALGAPA1Q6GYQ0 2036 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 CCL21O00585 134 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 CEACAM4O75871 244 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 CENPVQ7Z7K6 275 aaPredicted RBP11.37□□□□□ -0.59
SMC5-201ENST00000361138 LYPD6Q86Y78 171 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 TRAV2A0A0B4J234 112 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 AMN1Q8IY45 258 aa11.37□□□□□ -0.59
SMC5-201ENST00000361138 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 NUPR1O60356 82 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 SPINK8P0C7L1 97 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 ANAPC1Q9H1A4 1944 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 H7C1H1 209 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 GAGE2BQ13066 116 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 GAGE2EQ4V326 116 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 TMEM200BQ69YZ2 307 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 GAGE2DQ9UEU5 116 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 DNAL4O96015 105 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 TMEM158Q8WZ71 300 aa11.36□□□□□ -0.59
SMC5-201ENST00000361138 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
SMC5-201ENST00000361138 TRGV3P03979 118 aa11.35□□□□□ -0.59
SMC5-201ENST00000361138 LYPD1Q8N2G4 141 aa11.35□□□□□ -0.59
SMC5-201ENST00000361138 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
SMC5-201ENST00000361138 HAX1O00165 279 aa11.35□□□□□ -0.59
SMC5-201ENST00000361138 SNRPD3P62318 126 aaKnown RBP11.35□□□□□ -0.59
SMC5-201ENST00000361138 GAFA1Q96PS6 74 aa11.35□□□□□ -0.59
SMC5-201ENST00000361138 KIAA1671Q9BY89 1806 aa11.35□□□□□ -0.59
SMC5-201ENST00000361138 NTN3O00634 580 aaPredicted RBP11.35□□□□□ -0.59
SMC5-201ENST00000361138 TMEM95Q3KNT9 176 aa11.35□□□□□ -0.59
SMC5-201ENST00000361138 VWC2Q2TAL6 325 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 Q6ZVH6 145 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 TMEM105Q8N8V8 129 aa11.34□□□□□ -0.59
SMC5-201ENST00000361138 TMEM75Q8N9X5 138 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms