RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 HIST1H2BNQ99877 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BMQ99879 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 PIMREGQ9BSJ6 248 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 F11RQ9Y624 299 aaKnown RBP13.96□□□□□ -0.18
NPAS3-202ENST00000356141 CBY3A6NI87 242 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 OR5I1Q13606 314 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 C10orf113Q5VZT2 155 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 OR2T10Q8NGZ9 312 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 MS4A10Q96PG2 267 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 OR2J3O76001 311 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 SHISA2Q6UWI4 295 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 TMUB1Q9BVT8 246 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 DNAJC4Q9NNZ3 241 aa13.95□□□□□ -0.18
NPAS3-202ENST00000356141 PRRC2AP48634 2157 aaKnown RBP13.95□□□□□ -0.18
NPAS3-202ENST00000356141 SETD2Q9BYW2 2564 aaPredicted RBP13.94□□□□□ -0.18
NPAS3-202ENST00000356141 TRAV34A0A0B4J273 112 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 TCRBV4S1A1TA0A5B7 111 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 G3V318 75 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 TGOLN2O43493 480 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 FSTL3O95633 263 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 FAM3BP58499 235 aaPredicted RBP13.94□□□□□ -0.18
NPAS3-202ENST00000356141 RANP62826 216 aaKnown RBP13.94□□□□□ -0.18
NPAS3-202ENST00000356141 ELOBQ15370 118 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 C1QL4Q86Z23 238 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 SLC25A2Q9BXI2 301 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 ACANP16112 2415 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 GNG5P63218 68 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 RNASEH2CQ8TDP1 164 aaKnown RBP13.94□□□□□ -0.18
NPAS3-202ENST00000356141 NAT8Q9UHE5 227 aa13.94□□□□□ -0.18
NPAS3-202ENST00000356141 ITPR2Q14571 2701 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 MDFIC2A0A1B0GVS7 189 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 SLAQ13239 276 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 PRR31Q5SQ13 230 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 SELENOKQ9Y6D0 94 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 GGTLC3B5MD39 225 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 RPLP1P05386 114 aaKnown RBP13.93□□□□□ -0.18
NPAS3-202ENST00000356141 PSG1P11464 419 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 OR1P1Q8NH06 330 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 OR5R1Q8NH85 324 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 CACNG8Q8WXS5 425 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 AJUBAQ96IF1 538 aa13.93□□□□□ -0.18
NPAS3-202ENST00000356141 A0A1W2PPQ1 181 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 NPFFO15130 113 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 C10orf105Q8TEF2 133 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 ARPC1AQ92747 370 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 KCNIP2Q9NS61 270 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 TECRQ9NZ01 308 aaKnown RBP13.92□□□□□ -0.18
NPAS3-202ENST00000356141 GZMBP10144 247 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 BATFQ16520 125 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 C7orf69Q9H7B7 122 aa13.92□□□□□ -0.18
NPAS3-202ENST00000356141 SPINK4O60575 86 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 CDKN1BP46527 198 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 SLC17A3O00476 420 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 AVPP01185 164 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 TRGC2P03986 189 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 C8orf88P0DMB2 117 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 COX6B1P14854 86 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 IGHV3OR16-13A0A075B7E8 117 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 IGHV3-74A0A0B4J1X5 117 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 OR2T8A6NH00 312 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 TMEM238C9JI98 176 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 DNLZQ5SXM8 178 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 OCC1Q8TAD7 63 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 FAM167A-AS1Q96KT0 104 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BLQ99880 126 aa13.91□□□□□ -0.18
NPAS3-202ENST00000356141 A4D1N5 150 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 UBE2E1P51965 193 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 RASL11BQ9BPW5 248 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 NF1P21359 2839 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 TMEM250H0YL14 139 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 K7EIM0 57 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 Q56UQ5 140 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 CCDC144NLQ6NUI1 221 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 NUDT10Q8NFP7 164 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 PAXXQ9BUH6 204 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 HIF1ANQ9NWT6 349 aa13.9□□□□□ -0.18
NPAS3-202ENST00000356141 PSMB11A5LHX3 300 aa13.89□□□□□ -0.19
NPAS3-202ENST00000356141 H7BYZ3 331 aa13.89□□□□□ -0.19
NPAS3-202ENST00000356141 I3L2K1 104 aa13.89□□□□□ -0.19
NPAS3-202ENST00000356141 LINC01551Q86U37 167 aa13.89□□□□□ -0.19
NPAS3-202ENST00000356141 Q8N9W7 124 aa13.89□□□□□ -0.19
NPAS3-202ENST00000356141 ELOA3CA0A087WX78 387 aaPredicted RBP13.89□□□□□ -0.19
NPAS3-202ENST00000356141 IGHV7-81A0A0B4J1V7 117 aa13.89□□□□□ -0.19
NPAS3-202ENST00000356141 ATP6V0E1O15342 81 aa13.89□□□□□ -0.19
NPAS3-202ENST00000356141 MGST1P10620 155 aaKnown RBP13.89□□□□□ -0.19
NPAS3-202ENST00000356141 NDUFB8O95169 186 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 FAM106CPP0CH98 169 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 SLC35B1P78383 322 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 PQLC2Q6ZP29 291 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 LCNL1Q6ZST4 164 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 Q71RC1 249 aaPredicted RBP13.88□□□□□ -0.19
NPAS3-202ENST00000356141 MYO9AB2RTY4 2548 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 F6UZH7 168 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 CLDN34H7C241 214 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 JOSD1Q15040 202 aaPredicted RBP13.88□□□□□ -0.19
NPAS3-202ENST00000356141 UNQ5815/PRO19632Q6UWF5 114 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 C17orf77Q96MU5 243 aa13.88□□□□□ -0.19
NPAS3-202ENST00000356141 IGHV3-49A0A0A0MS15 119 aa13.87□□□□□ -0.19
NPAS3-202ENST00000356141 IGHV3-66A0A0C4DH42 116 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms