RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TOR2AQ5JU69 321 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 FAM209BQ5JX69 171 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 OR5AU1Q8NGC0 362 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 ZNF414Q96IQ9 312 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 SLC25A39Q9BZJ4 359 aaPredicted RBP12.04□□□□□ -0.48
CTSA-202ENST00000354880 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 RBFOX3A6NFN3 312 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 OR7C2O60412 319 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 PSMB3P49720 205 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 SRSF3P84103 164 aaKnown RBP12.04□□□□□ -0.48
CTSA-202ENST00000354880 TOMM20LQ6UXN7 152 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 FAM167A-AS1Q96KT0 104 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
CTSA-202ENST00000354880 SETD2Q9BYW2 2564 aaPredicted RBP12.03□□□□□ -0.48
CTSA-202ENST00000354880 BMPR1BO00238 502 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 IFNA1P01562 189 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 GCHFRP30047 84 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 HAGHQ16775 308 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 UBE2E2Q96LR5 201 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 OR5B12Q96R08 314 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 SLC25A2Q9BXI2 301 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 TMEM231Q9H6L2 316 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 ZFAND3Q9H8U3 227 aa12.03□□□□□ -0.48
CTSA-202ENST00000354880 PEF1Q9UBV8 284 aaKnown RBP12.03□□□□□ -0.48
CTSA-202ENST00000354880 NDUFA7O95182 113 aa12.02□□□□□ -0.48
CTSA-202ENST00000354880 CD5P06127 495 aa12.02□□□□□ -0.48
CTSA-202ENST00000354880 PPT1P50897 306 aa12.02□□□□□ -0.48
CTSA-202ENST00000354880 ZNF503Q96F45 646 aa12.02□□□□□ -0.48
CTSA-202ENST00000354880 RARRES2Q99969 163 aa12.02□□□□□ -0.48
CTSA-202ENST00000354880 TREM1Q9NP99 234 aa12.02□□□□□ -0.48
CTSA-202ENST00000354880 MANBALQ9NQG1 85 aa12.02□□□□□ -0.48
CTSA-202ENST00000354880 H3BRN7 92 aa12.02□□□□□ -0.49
CTSA-202ENST00000354880 I3L521 148 aa12.02□□□□□ -0.49
CTSA-202ENST00000354880 BCL2P10415 239 aa12.02□□□□□ -0.49
CTSA-202ENST00000354880 PEA15Q15121 130 aa12.02□□□□□ -0.49
CTSA-202ENST00000354880 WIPF2Q8TF74 440 aaPredicted RBP12.02□□□□□ -0.49
CTSA-202ENST00000354880 TMEM167BQ9NRX6 74 aa12.02□□□□□ -0.49
CTSA-202ENST00000354880 RABAC1Q9UI14 185 aa12.02□□□□□ -0.49
CTSA-202ENST00000354880 IGHV3OR16-8A0A075B7F1 116 aa12.01□□□□□ -0.49
CTSA-202ENST00000354880 GGCTO75223 188 aaKnown RBP12.01□□□□□ -0.49
CTSA-202ENST00000354880 LGALS1P09382 135 aaKnown RBP12.01□□□□□ -0.49
CTSA-202ENST00000354880 ZNF506Q5JVG8 444 aa12.01□□□□□ -0.49
CTSA-202ENST00000354880 LEMD1Q68G75 181 aa12.01□□□□□ -0.49
CTSA-202ENST00000354880 STXBP6Q8NFX7 210 aa12.01□□□□□ -0.49
CTSA-202ENST00000354880 NARS2Q96I59 477 aaKnown RBP12.01□□□□□ -0.49
CTSA-202ENST00000354880 SHANK2-AS3Q9BTD1 123 aa12.01□□□□□ -0.49
CTSA-202ENST00000354880 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
CTSA-202ENST00000354880 LOC102723971A0A1B0GUV8 181 aa12□□□□□ -0.49
CTSA-202ENST00000354880 NDUFA4O00483 81 aa12□□□□□ -0.49
CTSA-202ENST00000354880 OR10J4P0C629 311 aa12□□□□□ -0.49
CTSA-202ENST00000354880 S100A7P31151 101 aa12□□□□□ -0.49
CTSA-202ENST00000354880 ICAM4Q14773 271 aa12□□□□□ -0.49
CTSA-202ENST00000354880 TCTEX1D4Q5JR98 221 aa12□□□□□ -0.49
CTSA-202ENST00000354880 PAXXQ9BUH6 204 aa12□□□□□ -0.49
CTSA-202ENST00000354880 OR51M1Q9H341 326 aa12□□□□□ -0.49
CTSA-202ENST00000354880 ZNF98A6NK75 572 aa12□□□□□ -0.49
CTSA-202ENST00000354880 MAST4O15021 2626 aa12□□□□□ -0.49
CTSA-202ENST00000354880 PYYP10082 97 aa12□□□□□ -0.49
CTSA-202ENST00000354880 S100A1P23297 94 aa12□□□□□ -0.49
CTSA-202ENST00000354880 TAGLN2P37802 199 aaKnown RBP12□□□□□ -0.49
CTSA-202ENST00000354880 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
CTSA-202ENST00000354880 OR4F5Q8NH21 305 aa12□□□□□ -0.49
CTSA-202ENST00000354880 RXFP4Q8TDU9 374 aa12□□□□□ -0.49
CTSA-202ENST00000354880 VAX2Q9UIW0 290 aa12□□□□□ -0.49
CTSA-202ENST00000354880 C2CD3Q4AC94 2353 aa11.99□□□□□ -0.49
CTSA-202ENST00000354880 C9JQL5 133 aa11.99□□□□□ -0.49
CTSA-202ENST00000354880 PAGE4O60829 102 aa11.99□□□□□ -0.49
CTSA-202ENST00000354880 UBE2G2P60604 165 aa11.99□□□□□ -0.49
CTSA-202ENST00000354880 UBE2L3P68036 154 aaKnown RBP11.99□□□□□ -0.49
CTSA-202ENST00000354880 SUN5Q8TC36 379 aa11.99□□□□□ -0.49
CTSA-202ENST00000354880 C20orf24Q9BUV8 137 aa11.99□□□□□ -0.49
CTSA-202ENST00000354880 CLPSL1A2RUU4 121 aa11.98□□□□□ -0.49
CTSA-202ENST00000354880 HSPB1P04792 205 aaKnown RBP11.98□□□□□ -0.49
CTSA-202ENST00000354880 GP9P14770 177 aa11.98□□□□□ -0.49
CTSA-202ENST00000354880 SRSF2Q01130 221 aaKnown RBP11.98□□□□□ -0.49
CTSA-202ENST00000354880 METTL26Q96S19 204 aa11.98□□□□□ -0.49
CTSA-202ENST00000354880 RNF24Q9Y225 148 aa11.98□□□□□ -0.49
CTSA-202ENST00000354880 RNF114Q9Y508 228 aa11.98□□□□□ -0.49
CTSA-202ENST00000354880 TEP1Q99973 2627 aaKnown RBP11.98□□□□□ -0.49
CTSA-202ENST00000354880 TMEM218A2RU14 115 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
CTSA-202ENST00000354880 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 UNQ9165/PRO28630Q6UXU0 137 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 BPIFA4PQ86YQ2 179 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 FXYD5Q96DB9 178 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 TMEM14CQ9P0S9 112 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 KRBOX1C9JBD0 128 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 HAX1O00165 279 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 NPPCP23582 126 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 RPEL1Q2QD12 228 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 FAM106AQ4KMX7 169 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 CST9LP1Q5W188 147 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 GPHB5Q86YW7 130 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 TMEM190Q8WZ59 177 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 SLC35B3Q9H1N7 401 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 ARL2-SNX15V9GYD0 113 aa11.97□□□□□ -0.49
CTSA-202ENST00000354880 FAM74A7A6NL05 159 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms