RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 PRELID3BQ9Y3B1 194 aa1.77□□□□□ -2.13
VPS54-202ENST00000354504 UNC79Q9P2D8 2635 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 PPIAL4EA0A075B759 164 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 TRGV10A0A0A0MS01 117 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 IGHV7-81A0A0B4J1V7 117 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 TRAV5A0A0B4J249 113 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 UBE2L5PA0A1B0GUS4 154 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 A0A1W2PRV1 198 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 BTBD17A6NE02 478 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 C9JCJ5 164 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 INAFM1C9JVW0 142 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 USP17L23D6RBM5 183 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 F2Z2F3 143 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 PPIAL4DF5H284 164 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 FCGR3BO75015 233 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 CLN5O75503 358 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 GCGP01275 180 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 PPIAL4FP0DN26 164 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 NQO2P16083 231 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 TMEM11P17152 192 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 GNLYP22749 145 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 GATA2P23769 480 aaPredicted RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 KIR2DS2P43631 304 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 BPIFB3P59826 476 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 DEFA5Q01523 94 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 ZNF616Q08AN1 781 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 KLRD1Q13241 179 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 C10orf25Q5T742 122 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 MIC13Q5XKP0 118 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 FIP1L1Q6UN15 594 aaKnown RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 CMTM1Q8IZ96 169 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 SVBPQ8N300 66 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 TTC9CQ8N5M4 171 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 FRZBQ92765 325 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 KRTAP1-5Q9BYS1 174 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 PARLQ9H300 379 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 PPIAL4AQ9Y536 164 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 OR51B2Q9Y5P1 312 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 LY96Q9Y6Y9 160 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 NSD1Q96L73 2696 aaPredicted RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 A0A096LNJ9 63 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 TRAV8-2A0A0B4J237 113 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 CENPVL3A0A0U1RRI6 287 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 CTXND1A0A1B0GTU2 59 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 A0A1W2PRD5 423 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 A0A1W2PRF3 423 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 A0A1W2PRM7 423 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 M0QZ24 198 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 SLC17A3O00476 420 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 LTAP01374 205 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 ARL14EPLP0DKL9 152 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 RAB5AP20339 215 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 GPX4P36969 197 aaPredicted RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 HOXA1P49639 335 aaPredicted RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 FOXA3P55318 350 aaPredicted RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 KRTAP10-9P60411 292 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 MEF2BQ02080 365 aaPredicted RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 SSX2Q16385 188 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 PYY3Q5JQD4 70 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 TPTE2P1Q5T6R2 138 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 ADAMTSL5Q6ZMM2 481 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 APRG1Q8IVJ8 170 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 OR10G7Q8NGN6 311 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 RNASEH2CQ8TDP1 164 aaKnown RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 GTSF1Q8WW33 167 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 H1FXQ92522 213 aaKnown RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 GNPNAT1Q96EK6 184 aaPredicted RBP1.76□□□□□ -2.13
VPS54-202ENST00000354504 IMMP2LQ96T52 175 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 DYNLRB1Q9NP97 96 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 CBLN4Q9NTU7 201 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 ZNF586Q9NXT0 402 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 C1RLQ9NZP8 487 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 BAHCC1Q9P281 2608 aa1.76□□□□□ -2.13
VPS54-202ENST00000354504 IGHV2-70DA0A0C4DH43 119 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 A0A1B0GUS0 222 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 hDV102S1A0JD36 115 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 H7C2Y5 167 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 M0R1W7 72 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 M0R1X1 148 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 CCL21O00585 134 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 APELAP0DMC3 54 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 C4BPBP20851 252 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 RAB7AP51149 207 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 SIGLEC15Q6ZMC9 328 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 Q6ZQT7 251 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 MUC15Q8N387 334 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 OR5B3Q8NH48 314 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 OCC1Q8TAD7 63 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 CD300LFQ8TDQ1 290 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 TCTEX1D2Q8WW35 142 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 FAM104AQ969W3 186 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 TMEM186Q96B77 213 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 RNF183Q96D59 192 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 LINC00479Q96M42 142 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 SLC25A31Q9H0C2 315 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 VAX2Q9UIW0 290 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 F11RQ9Y624 299 aaKnown RBP1.75□□□□□ -2.13
VPS54-202ENST00000354504 KPTNQ9Y664 436 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 PXMP4Q9Y6I8 212 aa1.75□□□□□ -2.13
VPS54-202ENST00000354504 APOBP04114 4563 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms