RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NBDYA0A0U1RRE5 68 aa11.24□□□□□ -0.61
DDX55-202ENST00000354291 DUXBA0A1W2PPF3 345 aa11.24□□□□□ -0.61
DDX55-202ENST00000354291 S100A5P33763 92 aa11.24□□□□□ -0.61
DDX55-202ENST00000354291 KLF9Q13886 244 aaPredicted RBP11.24□□□□□ -0.61
DDX55-202ENST00000354291 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
DDX55-202ENST00000354291 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
DDX55-202ENST00000354291 PFDN2Q9UHV9 154 aa11.24□□□□□ -0.61
DDX55-202ENST00000354291 FLG2Q5D862 2391 aaPredicted RBP11.24□□□□□ -0.61
DDX55-202ENST00000354291 BUB3O43684 328 aa11.23□□□□□ -0.61
DDX55-202ENST00000354291 GPX4P36969 197 aaPredicted RBP11.23□□□□□ -0.61
DDX55-202ENST00000354291 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
DDX55-202ENST00000354291 USF2Q15853 346 aaPredicted RBP11.23□□□□□ -0.61
DDX55-202ENST00000354291 TMEM88Q6PEY1 159 aa11.23□□□□□ -0.61
DDX55-202ENST00000354291 TMED4Q7Z7H5 227 aa11.23□□□□□ -0.61
DDX55-202ENST00000354291 OR51G1Q8NGK1 321 aa11.23□□□□□ -0.61
DDX55-202ENST00000354291 TRIM63Q969Q1 353 aa11.23□□□□□ -0.61
DDX55-202ENST00000354291 SLC25A21Q9BQT8 299 aaPredicted RBP11.23□□□□□ -0.61
DDX55-202ENST00000354291 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
DDX55-202ENST00000354291 CCDC160A6NGH7 325 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 PSG1P11464 419 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 SLC25A6P12236 298 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 NUP62P37198 522 aaPredicted RBP11.22□□□□□ -0.61
DDX55-202ENST00000354291 FAM3BP58499 235 aaPredicted RBP11.22□□□□□ -0.61
DDX55-202ENST00000354291 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 NIPSNAP3BQ9BS92 247 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 V9GYH0 126 aa11.22□□□□□ -0.61
DDX55-202ENST00000354291 ZFP92A6NM28 416 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 PITX3O75364 302 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 FABP1P07148 127 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 KRTAP10-2P60368 255 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.61
DDX55-202ENST00000354291 RAB11AP62491 216 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 GAMTQ14353 236 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 PSMG4Q5JS54 123 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 SIGLEC15Q6ZMC9 328 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 RNF125Q96EQ8 232 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 SLC35E1Q96K37 410 aa11.21□□□□□ -0.61
DDX55-202ENST00000354291 IGHV3OR16-12A0A075B7B8 117 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 FAM90A26D6RGX4 464 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 MED6O75586 246 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 VAMP1P23763 118 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 FAM222AQ5U5X8 452 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 OR8G2PQ6IF36 304 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 PBDC1Q9BVG4 233 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 DKK2Q9UBU2 259 aa11.2□□□□□ -0.62
DDX55-202ENST00000354291 VPS13BQ7Z7G8 4022 aa11.19□□□□□ -0.62
DDX55-202ENST00000354291 SNRPGP15A8MWD9 76 aa11.19□□□□□ -0.62
DDX55-202ENST00000354291 RPP30P78346 268 aaKnown RBP11.19□□□□□ -0.62
DDX55-202ENST00000354291 ZNF79Q15937 498 aa11.19□□□□□ -0.62
DDX55-202ENST00000354291 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
DDX55-202ENST00000354291 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
DDX55-202ENST00000354291 SFT2D2O95562 160 aa11.18□□□□□ -0.62
DDX55-202ENST00000354291 ZNF90Q03938 601 aa11.18□□□□□ -0.62
DDX55-202ENST00000354291 SPANXN2Q5MJ10 180 aa11.18□□□□□ -0.62
DDX55-202ENST00000354291 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
DDX55-202ENST00000354291 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
DDX55-202ENST00000354291 IGKV1D-37A0A075B6S9 117 aa11.17□□□□□ -0.62
DDX55-202ENST00000354291 IAPPP10997 89 aa11.17□□□□□ -0.62
DDX55-202ENST00000354291 NKX2-1P43699 371 aaPredicted RBP11.17□□□□□ -0.62
DDX55-202ENST00000354291 PPP1R1AQ13522 171 aa11.17□□□□□ -0.62
DDX55-202ENST00000354291 NEU1Q99519 415 aa11.17□□□□□ -0.62
DDX55-202ENST00000354291 TRGV9Q99603 122 aa11.17□□□□□ -0.62
DDX55-202ENST00000354291 PAIP2BQ9ULR5 123 aaKnown RBP11.17□□□□□ -0.62
DDX55-202ENST00000354291 RFNGQ9Y644 331 aa11.17□□□□□ -0.62
DDX55-202ENST00000354291 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 H3BMM0 161 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 ZNF701M0R085 212 aaPredicted RBP11.16□□□□□ -0.62
DDX55-202ENST00000354291 SYNGR2O43760 224 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 CFDP00746 253 aaPredicted RBP11.16□□□□□ -0.62
DDX55-202ENST00000354291 ID1P41134 155 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
DDX55-202ENST00000354291 Q5VSD8 79 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 ZNF705AQ6ZN79 300 aaPredicted RBP11.16□□□□□ -0.62
DDX55-202ENST00000354291 C15orf53Q8NAA6 179 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 C18orf15Q96N68 181 aa11.16□□□□□ -0.62
DDX55-202ENST00000354291 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.62
DDX55-202ENST00000354291 WRBO00258 174 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 HOXB5P09067 269 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
DDX55-202ENST00000354291 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
DDX55-202ENST00000354291 INPP1P49441 399 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 FXYD7P58549 80 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 LYZP61626 148 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 GGNBP1Q5YKI7 109 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 PPP1R14BQ96C90 147 aa11.15□□□□□ -0.62
DDX55-202ENST00000354291 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
DDX55-202ENST00000354291 NAP1L6A6NFF2 107 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 DAD1P61803 113 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 DLK1P80370 383 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 OR2F1Q13607 317 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 OXA1LQ15070 435 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 OR8I2Q8N0Y5 310 aa11.14□□□□□ -0.63
DDX55-202ENST00000354291 LYPD1Q8N2G4 141 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms