RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PYURFQ96I23 114 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FAM210BQ96KR6 192 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FAM103A1Q9BTL3 118 aaKnown RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 GTSF1LQ9H1H1 148 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FAM60AQ9NP50 221 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SPANXB1Q9NS25 103 aaPredicted RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 AK3Q9UIJ7 227 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 VPREB3Q9UKI3 123 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 ANAPC10Q9UM13 185 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF835Q9Y2P0 537 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 MMACHCQ9Y4U1 282 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 A0A1W2PP64 1363 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 DSCAMO60469 2012 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 PLXNB1O43157 2135 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 DOT1LQ8TEK3 1739 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 NBEAL2Q6ZNJ1 2754 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 TNS3Q68CZ2 1445 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CLDN24A6NM45 220 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 OR2T1O43869 369 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FSTL3O95633 263 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SMIM6P0DI80 62 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FABP4P15090 132 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 PRPS1L1P21108 318 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 TPPP2P59282 170 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 KRTDAPP60985 99 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 PSG4Q00888 419 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 AKR1C1Q04828 323 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FABP9Q0Z7S8 132 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FAM229BQ4G0N7 80 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 TNFAIP8L2Q6P589 184 aaPredicted RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 KRTAP5-5Q701N2 237 aaPredicted RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CLDN22Q8N7P3 220 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 OR1L8Q8NGR8 309 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 GPR119Q8TDV5 335 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 Q8WTZ3 238 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 THEM6Q8WUY1 208 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SLC35B4Q969S0 331 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 BORCS8Q96FH0 119 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 IMP4Q96G21 291 aaKnown RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 TP53RKQ96S44 253 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 PKMYT1Q99640 499 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SPIN2AQ99865 258 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SPIN2BQ9BPZ2 258 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SMIM3Q9BZL3 60 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 UBQLN4Q9NRR5 601 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CISHQ9NSE2 258 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 TP53TG3Q9ULZ0 132 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SLC22A13Q9Y226 551 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CARHSP1Q9Y2V2 147 aaKnown RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 HSPE1-MOB4S4R3N1 261 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 RIF1Q5UIP0 2472 aaKnown RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF236Q9UL36 1845 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 APCP25054 2843 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 RFPL4AA6NLU0 287 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SIGLEC16A6NMB1 481 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 RFPL4AL1F8VTS6 287 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 H7BYZ3 331 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CYB5BO43169 146 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 MRPS14O60783 128 aaKnown RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 STK16O75716 305 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 GPR75O95800 540 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 C1QBP02746 253 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CRHP06850 196 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 MRPL3P09001 348 aaKnown RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 AKAIN1P0CW23 69 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SULT1A3P0DMM9 295 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SULT1A4P0DMN0 295 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SCGB1A1P11684 91 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CTSEP14091 401 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 CRYBB3P26998 211 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 RBP2P50120 134 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 EMP1P54849 157 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 HIST1H3AP68431 136 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 EIF4EBP2Q13542 120 aaPredicted RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 PMAIP1Q13794 54 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 ENDOGQ14249 297 aaKnown RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 TAF9Q16594 264 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 COL5A1-AS1Q5SY13 56 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 C5orf46Q6UWT4 87 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 TOMM20LQ6UXN7 152 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SCXQ7RTU7 201 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 LRP11Q86VZ4 500 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 UMODL1-AS1Q8N2C9 162 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 KRTCAP2Q8N6L1 136 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF680Q8NEM1 530 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 OR5D16Q8NGK9 328 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 JOSD2Q8TAC2 188 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FNDC9Q8TBE3 224 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 FAM213BQ8TBF2 198 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 PEBP4Q96S96 227 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 B9D2Q9BPU9 175 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 OR2D2Q9H210 308 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SLC39A9Q9NUM3 307 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 SOX21Q9Y651 276 aaPredicted RBP0.99□□□□□ -2.25
BRCA1-202ENST00000354071 PXMP4Q9Y6I8 212 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 AKAP13Q12802 2813 aa0.99□□□□□ -2.25
BRCA1-202ENST00000354071 DOCK3Q8IZD9 2030 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ANKARQ7Z5J8 1434 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 DSCAML1Q8TD84 2053 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 DDX60LQ5H9U9 1706 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms