RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 A0A1B0GWJ7 208 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 CACNG7P62955 275 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 SIGLEC15Q6ZMC9 328 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 PRSS22Q9GZN4 317 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
PTPN11-201ENST00000351677 C11orf44Q8N8P7 122 aa13.08□□□□□ -0.32
PTPN11-201ENST00000351677 PEMTQ9UBM1 199 aa13.08□□□□□ -0.32
PTPN11-201ENST00000351677 BUB1B-PAK6H3BSN5 160 aa13.08□□□□□ -0.32
PTPN11-201ENST00000351677 COL8A2P25067 703 aa13.08□□□□□ -0.32
PTPN11-201ENST00000351677 YAE1D1Q9NRH1 226 aa13.08□□□□□ -0.32
PTPN11-201ENST00000351677 IGKV3D-20A0A0C4DH25 116 aa13.08□□□□□ -0.32
PTPN11-201ENST00000351677 TRGV9Q99603 122 aa13.08□□□□□ -0.32
PTPN11-201ENST00000351677 TMEM256Q8N2U0 113 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 PLXND1Q9Y4D7 1925 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 ANAPC1Q9H1A4 1944 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 Q6ZS92 163 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 C1orf147Q96MC9 270 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-201ENST00000351677 TCRAP04437 139 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 TYMSP04818 313 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 SPCS1Q9Y6A9 102 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 C9JQL5 133 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 ETV2O00321 342 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-201ENST00000351677 SCGB1A1P11684 91 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 TOMM7Q9P0U1 55 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 TRGV2A0A075B6R0 118 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 H3BUT2 72 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 NCR2O95944 276 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 SRSF1Q07955 248 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTPN11-201ENST00000351677 MST1LQ2TV78 715 aa13.07□□□□□ -0.32
PTPN11-201ENST00000351677 EFNA4P52798 201 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 BRD3OSQ6XYD6 125 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 JMJD8Q96S16 334 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 SIGLEC9Q9Y336 463 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 COL6A6A6NMZ7 2263 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 CHCHD1Q96BP2 118 aaKnown RBP13.06□□□□□ -0.32
PTPN11-201ENST00000351677 ALKBH7Q9BT30 221 aaPredicted RBP13.06□□□□□ -0.32
PTPN11-201ENST00000351677 PLXNA2O75051 1894 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 IGFL4Q6B9Z1 124 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 SFTA2Q6UW10 78 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 RPRMLQ8N4K4 120 aa13.06□□□□□ -0.32
PTPN11-201ENST00000351677 NDPQ00604 133 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 NXT2Q9NPJ8 142 aaKnown RBP13.05□□□□□ -0.32
PTPN11-201ENST00000351677 CRIM1Q9NZV1 1036 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 ZNF407Q9C0G0 2248 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 RNASE2P10153 161 aaKnown RBP13.05□□□□□ -0.32
PTPN11-201ENST00000351677 SAMD13Q5VXD3 122 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 SPSB3Q6PJ21 355 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 C5orf64Q2M2E5 130 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 STHQ8IWL8 128 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 Q8TAT8 98 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 ZNF503-AS2A6NEH8 195 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 DPM2O94777 84 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 LIME1Q9H400 295 aa13.05□□□□□ -0.32
PTPN11-201ENST00000351677 DEFB104AQ8WTQ1 72 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 PPBPP02775 128 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 LYZL1Q6UWQ5 148 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-201ENST00000351677 NUP35Q8NFH5 326 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 NHP2Q9NX24 153 aaKnown RBP13.04□□□□□ -0.32
PTPN11-201ENST00000351677 D6R8Y8 96 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 DNAL4O96015 105 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 GNLYP22749 145 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 PCP4P48539 62 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 FXYD7P58549 80 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 VCX2Q9H322 139 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 F2Z2F3 143 aa13.04□□□□□ -0.32
PTPN11-201ENST00000351677 H3BRM9 83 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 E7EQL1 145 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 HTN3P15516 51 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 FNDC4Q9H6D8 234 aaPredicted RBP13.03□□□□□ -0.32
PTPN11-201ENST00000351677 NOTCH4Q99466 2003 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 PRR30Q53SZ7 412 aaPredicted RBP13.03□□□□□ -0.32
PTPN11-201ENST00000351677 LINC00479Q96M42 142 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 PKDREJQ9NTG1 2253 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 DOCK9Q9BZ29 2069 aa13.03□□□□□ -0.32
PTPN11-201ENST00000351677 IFI27P40305 119 aaPredicted RBP13.02□□□□□ -0.32
PTPN11-201ENST00000351677 MINOS1Q5TGZ0 78 aa13.02□□□□□ -0.32
PTPN11-201ENST00000351677 MINOS1-NBL1R4GNA1 71 aa13.02□□□□□ -0.32
PTPN11-201ENST00000351677 OVOL1O14753 267 aa13.02□□□□□ -0.32
PTPN11-201ENST00000351677 RNF5Q99942 180 aa13.02□□□□□ -0.32
PTPN11-201ENST00000351677 DUSP14O95147 198 aaKnown RBP13.02□□□□□ -0.33
PTPN11-201ENST00000351677 CYSLTR1Q9Y271 337 aa13.02□□□□□ -0.33
PTPN11-201ENST00000351677 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.33
PTPN11-201ENST00000351677 A6NNC1 897 aa13.02□□□□□ -0.33
PTPN11-201ENST00000351677 WDR86Q86TI4 376 aa13.02□□□□□ -0.33
PTPN11-201ENST00000351677 YLPM1P49750 1951 aaKnown RBP13.02□□□□□ -0.33
PTPN11-201ENST00000351677 RSPO1Q2MKA7 263 aaPredicted RBP13.01□□□□□ -0.33
PTPN11-201ENST00000351677 MRPS16Q9Y3D3 137 aaKnown RBP13.01□□□□□ -0.33
PTPN11-201ENST00000351677 CHTOPQ9Y3Y2 248 aaKnown RBP13.01□□□□□ -0.33
PTPN11-201ENST00000351677 H3BUX3 64 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 IGKCP01834 107 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 325.9 ms