RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 ZNF491Q8N8L2 437 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 OR51H1Q8NH63 302 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 C14orf144Q96I85 54 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 STAB1Q9NY15 2570 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 IGHV3-72A0A0B4J1Y9 119 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 RBFOX2O43251 390 aaKnown RBP eCLIP4.02□□□□□ -1.77
VCAM1-202ENST00000347652 IFNA1P01562 189 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 IFNA2P01563 188 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 GIPP09681 153 aaPredicted RBP4.02□□□□□ -1.77
VCAM1-202ENST00000347652 H2AFB1P0C5Y9 115 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 OR5AC1P0C628 307 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 CKS1BP61024 79 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 ZNF266Q14584 549 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 DEFB112Q30KQ8 113 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 SP6Q3SY56 376 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 PDPNQ86YL7 162 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 PIFOQ8TCI5 191 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 RBMXL1Q96E39 390 aaKnown RBP4.02□□□□□ -1.77
VCAM1-202ENST00000347652 RITA1Q96K30 269 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 TMEM222Q9H0R3 208 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 PLEKHA3Q9HB20 300 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 WASHC3Q9Y3C0 194 aa4.02□□□□□ -1.77
VCAM1-202ENST00000347652 SNRPGP15A8MWD9 76 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 DUS4LO95620 317 aaKnown RBP4.01□□□□□ -1.77
VCAM1-202ENST00000347652 CDS2O95674 445 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 HPRT1P00492 218 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 IGKV1-39P01597 117 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 APOA2P02652 100 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 IGKV1-16P04430 117 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 IGKV1D-39P04432 117 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 BRS3P32247 399 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 LPAR6P43657 344 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 LGALS7P47929 136 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 RAB13P51153 203 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
VCAM1-202ENST00000347652 RTL8BQ17RB0 113 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 OR2B11Q5JQS5 317 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 Q6YL49 198 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 Q6ZNX1 250 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 COQ8AQ8NI60 647 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 ZNF431Q8TF32 576 aaPredicted RBP4.01□□□□□ -1.77
VCAM1-202ENST00000347652 FAM218AQ96MZ4 157 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 C11orf21Q9P2W6 132 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 A0A0B4J2A0 478 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 C7orf66A4D0T2 115 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 SMKR1H3BMG3 65 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 H7C2Y5 167 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 CD24P25063 80 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.77
VCAM1-202ENST00000347652 PVRIGQ6DKI7 326 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 Q8N6K4 173 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 OR4S2Q8NH73 311 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 IL22RA2Q969J5 263 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 RNF5Q99942 180 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 RNASE7Q9H1E1 156 aaKnown RBP4.01□□□□□ -1.77
VCAM1-202ENST00000347652 SHPKQ9UHJ6 478 aa4.01□□□□□ -1.77
VCAM1-202ENST00000347652 FAM240AA0A1B0GVK7 77 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 OR4C46A6NHA9 309 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 K7EP13 123 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 MOSP00540 346 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 IGKV1D-33P01593 117 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 IGKV1-33P01594 117 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 IGLV2-23P01705 113 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 OR10J4P0C629 311 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 OR9G9P0C7N8 305 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 FAM106CPP0CH98 169 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 SCGB1A1P11684 91 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 CXCL3P19876 107 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 SULT1A1P50225 295 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 SULT1A2P50226 295 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 KRTAP24-1Q3LI83 254 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 SAMD13Q5VXD3 122 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 FAM19A5Q7Z5A7 132 aaPredicted RBP4□□□□□ -1.77
VCAM1-202ENST00000347652 SIGLECL1Q8N7X8 197 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 OR2T10Q8NGZ9 312 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 OSR1Q8TAX0 266 aaPredicted RBP4□□□□□ -1.77
VCAM1-202ENST00000347652 RCHY1Q96PM5 261 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 TNFRSF19Q9NS68 423 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 COMMD9Q9P000 198 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 PRO0628Q9UI54 55 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 TRRAPQ9Y4A5 3859 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 A6NDX4 124 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 CREBL2O60519 120 aaPredicted RBP4□□□□□ -1.77
VCAM1-202ENST00000347652 RND2P52198 227 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 SRPXP78539 464 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 ZNF616Q08AN1 781 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 ZNF695Q8IW36 515 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 C12orf45Q8N5I9 185 aaPredicted RBP4□□□□□ -1.77
VCAM1-202ENST00000347652 NPBQ8NG41 125 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 RBPMSQ93062 196 aaKnown RBP4□□□□□ -1.77
VCAM1-202ENST00000347652 SEC22AQ96IW7 307 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 C2orf48Q96LS8 159 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 SLC25A39Q9BZJ4 359 aaPredicted RBP4□□□□□ -1.77
VCAM1-202ENST00000347652 PLSCR3Q9NRY6 295 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 AURKAIP1Q9NWT8 199 aaPredicted RBP4□□□□□ -1.77
VCAM1-202ENST00000347652 ANK2Q01484 3957 aa4□□□□□ -1.77
VCAM1-202ENST00000347652 PIGBOS1A0A0B4J2F0 54 aa3.99□□□□□ -1.77
VCAM1-202ENST00000347652 DUXBA0A1W2PPF3 345 aa3.99□□□□□ -1.77
VCAM1-202ENST00000347652 H3BUX3 64 aa3.99□□□□□ -1.77
VCAM1-202ENST00000347652 CYB5BO43169 146 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms