RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 A0A0G2JLM5 398 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 NUPL2O15504 423 aaKnown RBP8.49□□□□□ -1.05
ECM1-201ENST00000346569 TGOLN2O43493 480 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 IFNA1P01562 189 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 PF4V1P10720 104 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 GPR183P32249 361 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 TPPP2P59282 170 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 CD81P60033 236 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 LYZP61626 148 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 ZNF343Q6P1L6 599 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 ZNF600Q6ZNG1 722 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 RNF152Q8N8N0 203 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 RNF125Q96EQ8 232 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 SLC25A39Q9BZJ4 359 aaPredicted RBP8.49□□□□□ -1.05
ECM1-201ENST00000346569 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
ECM1-201ENST00000346569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.48□□□□□ -1.05
ECM1-201ENST00000346569 PAGE4O60829 102 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 SCGB2A1O75556 95 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 IL4P05112 153 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 ELANEP08246 267 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 SFTA3P0C7M3 94 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 SRD5A1P18405 259 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 USF2Q15853 346 aaPredicted RBP8.48□□□□□ -1.05
ECM1-201ENST00000346569 TOMM20LQ6UXN7 152 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 LCNL1Q6ZST4 164 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 Q6ZSV7 163 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 OR5AU1Q8NGC0 362 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 MYOZ3Q8TDC0 251 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 TXNDC17Q9BRA2 123 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 SHANK2-AS3Q9BTD1 123 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 OR51M1Q9H341 326 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 TMEM167BQ9NRX6 74 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 CARHSP1Q9Y2V2 147 aaKnown RBP8.48□□□□□ -1.05
ECM1-201ENST00000346569 PUS1Q9Y606 427 aaKnown RBP eCLIP8.48□□□□□ -1.05
ECM1-201ENST00000346569 HIVEP2P31629 2446 aa8.48□□□□□ -1.05
ECM1-201ENST00000346569 F8W036 122 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 H3BRN7 92 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 RNASE1P07998 156 aaKnown RBP8.47□□□□□ -1.05
ECM1-201ENST00000346569 RPL15P61313 204 aaKnown RBP8.47□□□□□ -1.05
ECM1-201ENST00000346569 MEF2BQ02080 365 aaPredicted RBP8.47□□□□□ -1.05
ECM1-201ENST00000346569 FOXE3Q13461 319 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 TEX38Q6PEX7 206 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 STXBP6Q8NFX7 210 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 ZNF418Q8TF45 676 aaPredicted RBP8.47□□□□□ -1.05
ECM1-201ENST00000346569 NARS2Q96I59 477 aaKnown RBP8.47□□□□□ -1.05
ECM1-201ENST00000346569 PAXXQ9BUH6 204 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 ZFAND3Q9H8U3 227 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 ARL2-SNX15V9GYD0 113 aa8.47□□□□□ -1.05
ECM1-201ENST00000346569 ZNF98A6NK75 572 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 FAM74A7A6NL05 159 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 OR7C2O60412 319 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 HILS1P60008 231 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 SLC35B1P78383 322 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 CCDC28AQ8IWP9 274 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 IQCF2Q8IXL9 164 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 OR4X2Q8NGF9 303 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 FXYD5Q96DB9 178 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 TMEM14CQ9P0S9 112 aa8.46□□□□□ -1.05
ECM1-201ENST00000346569 YTHDF2Q9Y5A9 579 aaKnown RBP8.46□□□□□ -1.05
ECM1-201ENST00000346569 FN1P02751 2386 aaKnown RBP8.46□□□□□ -1.06
ECM1-201ENST00000346569 IGHV3-35A0A0C4DH35 117 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 A0A1W2PRE2 83 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 CLPSL1A2RUU4 121 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 C11orf94C9JXX5 98 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 PPP5D1E7EU14 171 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 TMEM250H0YL14 139 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 MRPS12O15235 138 aaKnown RBP8.46□□□□□ -1.06
ECM1-201ENST00000346569 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 APOC3P02656 99 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 PYYP10082 97 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 GP9P14770 177 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 NPPCP23582 126 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 ATP5G3P48201 142 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 UBE2G2P60604 165 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
ECM1-201ENST00000346569 SOHLH1Q5JUK2 328 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 FAM90A2PQ658T7 463 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 LEMD1Q68G75 181 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 S100A7AQ86SG5 101 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 WIPF2Q8TF74 440 aaPredicted RBP8.46□□□□□ -1.06
ECM1-201ENST00000346569 C16orf95Q9H693 158 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 U3KQE9 123 aa8.46□□□□□ -1.06
ECM1-201ENST00000346569 INAFM1C9JVW0 142 aa8.45□□□□□ -1.06
ECM1-201ENST00000346569 BMPR1BO00238 502 aa8.45□□□□□ -1.06
ECM1-201ENST00000346569 RPLP1P05386 114 aaKnown RBP8.45□□□□□ -1.06
ECM1-201ENST00000346569 OR10J4P0C629 311 aa8.45□□□□□ -1.06
ECM1-201ENST00000346569 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
ECM1-201ENST00000346569 ARL3P36405 182 aa8.45□□□□□ -1.06
ECM1-201ENST00000346569 FAM209BQ5JX69 171 aa8.45□□□□□ -1.06
ECM1-201ENST00000346569 Q71RC1 249 aaPredicted RBP8.45□□□□□ -1.06
ECM1-201ENST00000346569 PEF1Q9UBV8 284 aaKnown RBP8.45□□□□□ -1.06
ECM1-201ENST00000346569 NDUFA4O00483 81 aa8.44□□□□□ -1.06
ECM1-201ENST00000346569 PDE6DO43924 150 aa8.44□□□□□ -1.06
ECM1-201ENST00000346569 HIST1H1EP10412 219 aaKnown RBP8.44□□□□□ -1.06
ECM1-201ENST00000346569 CRYBB3P26998 211 aa8.44□□□□□ -1.06
ECM1-201ENST00000346569 MYCNOSP40205 109 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms