RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 YPEL3P61236 119 aaPredicted RBP7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 Q6AWC8 147 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 ZFP30Q9Y2G7 519 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 YTHDF2Q9Y5A9 579 aaKnown RBP7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 A0A1B0GUS0 222 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 LYPD1Q8N2G4 141 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 NPBQ8NG41 125 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 SCO1O75880 301 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 FAM120AOSQ5T036 256 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 TBX15Q96SF7 602 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 LAMA3Q16787 3333 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 MYO18BQ8IUG5 2567 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 TRAV1-1A0A0B4J248 108 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 WIPF3A6NGB9 483 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 IER3P46695 156 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 EPDR1Q9UM22 224 aa7.46□□□□□ -1.22
FNDC3B-201ENST00000336824 A8MXK9 166 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 LINC01619G3V211 115 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 KCNS1Q96KK3 526 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 SCO2A0A1W2PP80 73 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 EIF4E3Q8N5X7 224 aaKnown RBP7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 C2CD4CQ8TF44 421 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 DUX3Q96PT4 197 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 ARL2-SNX15V9GYD0 113 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 TTC9CQ8N5M4 171 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 TRBV9A0A0B4J1U6 114 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 ZNF98A6NK75 572 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 EIF3GO75821 320 aaKnown RBP eCLIP7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 ASIPP42127 132 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 PRDM13Q9H4Q3 707 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 GOLT1BQ9Y3E0 138 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 IGHV4-38-2P0DP08 117 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 WNK1Q9H4A3 2382 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 IGHV4-59P01825 116 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 PDE6HQ13956 83 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 Q71RC1 249 aaPredicted RBP7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 NAV2Q8IVL1 2488 aa7.45□□□□□ -1.22
FNDC3B-201ENST00000336824 CCDC168Q8NDH2 2452 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 STAG3L2P0CL84 134 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 CCL20P78556 96 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 DIAPH2-AS1Q14236 149 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 FAM53AQ6NSI3 398 aaPredicted RBP7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 PMS2P5A8MQ11 134 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 PPP1R17O96001 155 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 IL17RELQ6ZVW7 336 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 SCRT1Q9BWW7 348 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 ZFP36P26651 326 aaKnown RBP7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 PGLYRP4Q96LB8 373 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 FABP5P3A8MUU1 101 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 TMEM50AO95807 157 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 IFITM2Q01629 132 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 PDZD11Q5EBL8 140 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 SGK494Q96LW2 274 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 TRAV21A0A0B4J279 112 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 CBY3A6NI87 242 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 ZNF253O75346 499 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 IGKV1-39P01597 117 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 IGKV1D-39P04432 117 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 PYYP10082 97 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 CKS2P33552 79 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 OR1N2Q8NGR9 330 aa7.44□□□□□ -1.22
FNDC3B-201ENST00000336824 PLXNB1O43157 2135 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 NPIPB6E9PJ23 425 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 ATP5G3P48201 142 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 RPL15P61313 204 aaKnown RBP7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 KLHDC1Q8N7A1 406 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 LINC01587Q99440 93 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 MCRIP2Q9BUT9 160 aaKnown RBP7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 LINC00574Q9H8X3 128 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 TSSC4Q9Y5U2 329 aaPredicted RBP7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 G3V318 75 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 NDUFA4O00483 81 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 PMCHP20382 165 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 RNASE4P34096 147 aaKnown RBP7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 TRAV34A0A0B4J273 112 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 H7C1H1 209 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 C1orf194Q5T5A4 169 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 SIRPDQ9H106 197 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 HSPB8Q9UJY1 196 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 SOX21Q9Y651 276 aaPredicted RBP7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 A0A1B0GW15 77 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 SRP19P09132 144 aaKnown RBP7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 PSMG4Q5JS54 123 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 LCN12Q6JVE5 192 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 LMO4P61968 165 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 SRRM4A7MD48 611 aaKnown RBP7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 IGLV1-47P01700 117 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 AMTP48728 403 aa7.43□□□□□ -1.22
FNDC3B-201ENST00000336824 LY6G5BQ8NDX9 201 aa7.42□□□□□ -1.22
FNDC3B-201ENST00000336824 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
FNDC3B-201ENST00000336824 C19orf35Q6ZS72 473 aa7.42□□□□□ -1.22
FNDC3B-201ENST00000336824 RHPN1-AS1Q9BWJ2 59 aa7.42□□□□□ -1.22
FNDC3B-201ENST00000336824 WT1-ASQ06250 92 aa7.42□□□□□ -1.22
FNDC3B-201ENST00000336824 TMEM86BQ8N661 226 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms