RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 HIGD1AQ9Y241 93 aa13.78□□□□□ -0.2
DDX28-201ENST00000332395 OOSP1A8MZH6 123 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 MINOS1Q5TGZ0 78 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 LEMD1Q68G75 181 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 TEX43Q6ZNM6 134 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 OR8I2Q8N0Y5 310 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 OR1L6Q8NGR2 347 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 MIEN1Q9BRT3 115 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 SIRPDQ9H106 197 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 MINOS1-NBL1R4GNA1 71 aa13.77□□□□□ -0.21
DDX28-201ENST00000332395 TRAV34A0A0B4J273 112 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 IGKV1-17P01599 117 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 CBLN1P23435 193 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 GNG5P63218 68 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 PAFAH1B2P68402 229 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 ABCA1O95477 2261 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 TPPP2P59282 170 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 TOMM20LQ6UXN7 152 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 Q6ZWC4 215 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 TP53TG3Q9ULZ0 132 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 EPDR1Q9UM22 224 aa13.76□□□□□ -0.21
DDX28-201ENST00000332395 PGPA6NDG6 321 aa13.75□□□□□ -0.21
DDX28-201ENST00000332395 SLC25A5P05141 298 aaKnown RBP13.75□□□□□ -0.21
DDX28-201ENST00000332395 ESDP10768 282 aa13.75□□□□□ -0.21
DDX28-201ENST00000332395 BAGE2Q86Y30 109 aa13.75□□□□□ -0.21
DDX28-201ENST00000332395 Q8N6K4 173 aa13.75□□□□□ -0.21
DDX28-201ENST00000332395 IGHV2-70DA0A0C4DH43 119 aa13.75□□□□□ -0.21
DDX28-201ENST00000332395 NCBP2LA6PVI3 153 aaKnown RBP13.75□□□□□ -0.21
DDX28-201ENST00000332395 NPSP0C0P6 89 aa13.75□□□□□ -0.21
DDX28-201ENST00000332395 ZNF562Q6V9R5 426 aa13.75□□□□□ -0.21
DDX28-201ENST00000332395 SLC25A39Q9BZJ4 359 aaPredicted RBP13.75□□□□□ -0.21
DDX28-201ENST00000332395 GRIFINA4D1Z8 144 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 LINC00614P0C842 121 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 LINC00310P59036 64 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 CX3CL1P78423 397 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 TMEM183BQ1AE95 376 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 KLF17Q5JT82 389 aaPredicted RBP13.74□□□□□ -0.21
DDX28-201ENST00000332395 ARPC1AQ92747 370 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 BPESC1Q9GZL8 116 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 SERTAD4Q9NUC0 356 aa13.74□□□□□ -0.21
DDX28-201ENST00000332395 TOX4O94842 621 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 FRMD6-AS1P0C7T7 363 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 BRS3P32247 399 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 IER3P46695 156 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 NDPQ00604 133 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 EBI3Q14213 229 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 TDRG1Q3Y452 100 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 ASPHD1Q5U4P2 390 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 MRPL18Q9H0U6 180 aaKnown RBP13.73□□□□□ -0.21
DDX28-201ENST00000332395 MRPL27Q9P0M9 148 aaKnown RBP13.73□□□□□ -0.21
DDX28-201ENST00000332395 ASH1LQ9NR48 2969 aaKnown RBP13.73□□□□□ -0.21
DDX28-201ENST00000332395 NPIPB5A8MRT5 1133 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 H3BTX0 84 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 CD33P20138 364 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 UBE2G1P62253 170 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 PKD1L2Q7Z442 2459 aa13.73□□□□□ -0.21
DDX28-201ENST00000332395 SMIM27A0A1W2PRY6 76 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 TMEM11P17152 192 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 TCL1AP56279 114 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 C5orf17Q8NAS9 161 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 Q9H3A6 140 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 LPAR2Q9HBW0 351 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 CBY1Q9Y3M2 126 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 TRBV9A0A0B4J1U6 114 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 SNURFLB1AK76 121 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 LMO4P61968 165 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 RPL19P84098 196 aaKnown RBP13.72□□□□□ -0.21
DDX28-201ENST00000332395 FAM231DQ6ZW35 169 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 FANCD2OSQ96PS1 177 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 TMEM14CQ9P0S9 112 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 RPH3ALQ9UNE2 315 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 TBL2Q9Y4P3 447 aaKnown RBP13.72□□□□□ -0.21
DDX28-201ENST00000332395 KLF12Q9Y4X4 402 aa13.72□□□□□ -0.21
DDX28-201ENST00000332395 IGLV11-55A0A075B6I3 123 aa13.71□□□□□ -0.21
DDX28-201ENST00000332395 SPINK4O60575 86 aa13.71□□□□□ -0.21
DDX28-201ENST00000332395 CA1P00915 261 aaPredicted RBP13.71□□□□□ -0.21
DDX28-201ENST00000332395 GNB1LQ9BYB4 327 aa13.71□□□□□ -0.21
DDX28-201ENST00000332395 S4R3C0 116 aa13.71□□□□□ -0.21
DDX28-201ENST00000332395 OVOL3O00110 214 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 SERF1AO75920 110 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 TOMM40O96008 361 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 UBE2E1P51965 193 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 SLC35B1P78383 322 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 TTC9CQ8N5M4 171 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 SGK494Q96LW2 274 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 HSPB9Q9BQS6 159 aa13.71□□□□□ -0.22
DDX28-201ENST00000332395 CSMD1Q96PZ7 3565 aa13.7□□□□□ -0.22
DDX28-201ENST00000332395 PIEZO1Q92508 2521 aa13.7□□□□□ -0.22
DDX28-201ENST00000332395 HIST1H1EP10412 219 aaKnown RBP13.7□□□□□ -0.22
DDX28-201ENST00000332395 CRISP2P16562 243 aa13.7□□□□□ -0.22
DDX28-201ENST00000332395 FAM168AQ92567 244 aa13.7□□□□□ -0.22
DDX28-201ENST00000332395 VAMP8Q9BV40 100 aa13.7□□□□□ -0.22
DDX28-201ENST00000332395 ZNF586Q9NXT0 402 aa13.7□□□□□ -0.22
DDX28-201ENST00000332395 CACNA1AO00555 2505 aa13.7□□□□□ -0.22
DDX28-201ENST00000332395 TCRAP04437 139 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 PRR27Q6MZM9 219 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 ZNF491Q8N8L2 437 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 NUDT10Q8NFP7 164 aa13.69□□□□□ -0.22
DDX28-201ENST00000332395 RNF125Q96EQ8 232 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms