RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PAX4O43316 350 aa17.24■□□□□ 0.35
RNF40-201ENST00000324685 PIKFYVEQ9Y2I7 2098 aa17.24■□□□□ 0.35
RNF40-201ENST00000324685 POLR2AP24928 1970 aaKnown RBP17.24■□□□□ 0.35
RNF40-201ENST00000324685 M0R1W7 72 aa17.24■□□□□ 0.35
RNF40-201ENST00000324685 MST1P26927 711 aa17.24■□□□□ 0.35
RNF40-201ENST00000324685 SSBP2P81877 361 aaPredicted RBP17.24■□□□□ 0.35
RNF40-201ENST00000324685 SAP30O75446 220 aa17.24■□□□□ 0.35
RNF40-201ENST00000324685 LINC00527Q9UJ94 153 aa17.24■□□□□ 0.35
RNF40-201ENST00000324685 KNTC1P50748 2209 aa17.23■□□□□ 0.35
RNF40-201ENST00000324685 HGFACQ04756 655 aa17.23■□□□□ 0.35
RNF40-201ENST00000324685 PSPNO60542 156 aa17.23■□□□□ 0.35
RNF40-201ENST00000324685 NPC2P61916 151 aa17.23■□□□□ 0.35
RNF40-201ENST00000324685 ZNF124Q15973 351 aa17.23■□□□□ 0.35
RNF40-201ENST00000324685 DLX4Q92988 240 aaPredicted RBP17.23■□□□□ 0.35
RNF40-201ENST00000324685 LSM4Q9Y4Z0 139 aaKnown RBP17.23■□□□□ 0.35
RNF40-201ENST00000324685 ZNF562Q6V9R5 426 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 DMRTC2Q8IXT2 367 aaPredicted RBP17.22■□□□□ 0.35
RNF40-201ENST00000324685 SRRM4A7MD48 611 aaKnown RBP17.22■□□□□ 0.35
RNF40-201ENST00000324685 GLRX5Q86SX6 157 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 TRAV3A0A0B4J244 114 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 FAM223BA6NKX1 122 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 FAM223AQ8IWN6 122 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 PRTN3P24158 256 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 C2orf82Q6UX34 121 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 PNRC2Q9NPJ4 139 aaKnown RBP17.22■□□□□ 0.35
RNF40-201ENST00000324685 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
RNF40-201ENST00000324685 C5orf64Q2M2E5 130 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 USMG5Q96IX5 58 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 REG4Q9BYZ8 158 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 LAMTOR3Q9UHA4 124 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 FNDC10F2Z333 226 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 CDK2AP2O75956 126 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 IGHV3-73A0A0B4J1V6 119 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 LCN12Q6JVE5 192 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 RP1L1Q8IWN7 2480 aaPredicted RBP17.21■□□□□ 0.35
RNF40-201ENST00000324685 SYS1-DBNDD2H3BUS1 97 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 HIST1H4AP62805 103 aaKnown RBP17.21■□□□□ 0.35
RNF40-201ENST00000324685 ERCC8Q13216 396 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 ZNF474Q6S9Z5 364 aaPredicted RBP17.21■□□□□ 0.35
RNF40-201ENST00000324685 CSTL1Q9H114 145 aa17.21■□□□□ 0.35
RNF40-201ENST00000324685 TRGV1A0A0A0MS02 117 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 hDV102S1A0JD36 115 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 SELLP14151 372 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 FOXG1P55316 489 aaPredicted RBP17.2■□□□□ 0.34
RNF40-201ENST00000324685 SPACA3Q8IXA5 215 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 PSME4Q14997 1843 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 NDUFS8O00217 210 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 LEPROTO15243 131 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 DLEU1O43261 78 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 C3orf79P0CE67 100 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 KLRD1Q13241 179 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 GAFA1Q96PS6 74 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 SCN10AQ9Y5Y9 1956 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 C20orf204Q6ZNR8 217 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 MYMXA0A1B0GTQ4 84 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 Q6ZS49 121 aa17.2■□□□□ 0.34
RNF40-201ENST00000324685 SSC4DQ8WTU2 575 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 GFRA4Q9GZZ7 299 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 BUB1B-PAK6H3BSN5 160 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 TMEM219Q86XT9 240 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 UBE2DNLQ8IWF7 75 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 NTF4P34130 210 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 ZNF329Q86UD4 541 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 LYL1P12980 280 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 Q6P435 159 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 TMEM158Q8WZ71 300 aa17.19■□□□□ 0.34
RNF40-201ENST00000324685 MAP1BP46821 2468 aaKnown RBP17.18■□□□□ 0.34
RNF40-201ENST00000324685 ITGB1BP1O14713 200 aa17.18■□□□□ 0.34
RNF40-201ENST00000324685 TMEM256Q8N2U0 113 aa17.18■□□□□ 0.34
RNF40-201ENST00000324685 INSP01308 110 aa17.18■□□□□ 0.34
RNF40-201ENST00000324685 SRSF8Q9BRL6 282 aaKnown RBP17.18■□□□□ 0.34
RNF40-201ENST00000324685 TDRD6O60522 2096 aaKnown RBP17.18■□□□□ 0.34
RNF40-201ENST00000324685 F8WEM9 126 aa17.18■□□□□ 0.34
RNF40-201ENST00000324685 LILRA1O75019 489 aa17.18■□□□□ 0.34
RNF40-201ENST00000324685 TNFRSF6BO95407 300 aa17.18■□□□□ 0.34
RNF40-201ENST00000324685 PRB4P10163 310 aaPredicted RBP17.17■□□□□ 0.34
RNF40-201ENST00000324685 DNAJC30Q96LL9 226 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 C11orf44Q8N8P7 122 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 RFNGQ9Y644 331 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 A0A087X0K7 114 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 ESDP10768 282 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 TMEM249Q2WGJ8 235 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 DNAJC13O75165 2243 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 CLPSP04118 112 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 C1QTNF4Q9BXJ3 329 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 SIGLEC9Q9Y336 463 aa17.17■□□□□ 0.34
RNF40-201ENST00000324685 VWC2LB2RUY7 222 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 B4DSR2 109 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 CD59P13987 128 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 NAA38Q9BRA0 125 aaKnown RBP17.16■□□□□ 0.34
RNF40-201ENST00000324685 LINC00473A8K010 186 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 QRFPP83859 136 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 Q8TAT8 98 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 FCN3O75636 299 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 TIMM21Q9BVV7 248 aa17.16■□□□□ 0.34
RNF40-201ENST00000324685 NDPQ00604 133 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 Q86TA4 180 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 FXYD7P58549 80 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 KIR3DS1Q14943 382 aa17.15■□□□□ 0.34
RNF40-201ENST00000324685 C14orf178Q8N769 122 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms