RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PEF1Q9UBV8 284 aaKnown RBP13.96□□□□□ -0.18
SYNE4-201ENST00000324444 GGCTO75223 188 aaKnown RBP13.95□□□□□ -0.18
SYNE4-201ENST00000324444 IL4P05112 153 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 STAG3L2P0CL84 134 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 STAG3L3P0CL85 134 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 C8orf88P0DMB2 117 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 ZNF726P1Q15940 193 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 EIF4E3Q8N5X7 224 aaKnown RBP13.95□□□□□ -0.18
SYNE4-201ENST00000324444 ZNF491Q8N8L2 437 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 OR5AU1Q8NGC0 362 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
SYNE4-201ENST00000324444 GCSAMLQ5JQS6 135 aa13.94□□□□□ -0.18
SYNE4-201ENST00000324444 LINC00305Q7Z4B0 112 aa13.94□□□□□ -0.18
SYNE4-201ENST00000324444 TMEM37Q8WXS4 190 aa13.94□□□□□ -0.18
SYNE4-201ENST00000324444 TMEM167BQ9NRX6 74 aa13.94□□□□□ -0.18
SYNE4-201ENST00000324444 MRPL27Q9P0M9 148 aaKnown RBP13.94□□□□□ -0.18
SYNE4-201ENST00000324444 PKD1L1Q8TDX9 2849 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 ANKRD34BA5PLL1 514 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 NDUFA4O00483 81 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 ADMP35318 185 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 CDX1P47902 265 aaPredicted RBP13.93□□□□□ -0.18
SYNE4-201ENST00000324444 DEFA5Q01523 94 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 CHRDL1Q9BU40 450 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 SEPSECSQ9HD40 501 aaKnown RBP13.93□□□□□ -0.18
SYNE4-201ENST00000324444 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 DOK5Q9P104 306 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 RABAC1Q9UI14 185 aa13.93□□□□□ -0.18
SYNE4-201ENST00000324444 PUS1Q9Y606 427 aaKnown RBP eCLIP13.93□□□□□ -0.18
SYNE4-201ENST00000324444 RPLP1P05386 114 aaKnown RBP13.92□□□□□ -0.18
SYNE4-201ENST00000324444 LGALS1P09382 135 aaKnown RBP13.92□□□□□ -0.18
SYNE4-201ENST00000324444 PEA15Q15121 130 aa13.92□□□□□ -0.18
SYNE4-201ENST00000324444 LINC01006Q8NI28 216 aa13.92□□□□□ -0.18
SYNE4-201ENST00000324444 NARS2Q96I59 477 aaKnown RBP13.92□□□□□ -0.18
SYNE4-201ENST00000324444 FAM210AQ96ND0 272 aa13.92□□□□□ -0.18
SYNE4-201ENST00000324444 TRRAPQ9Y4A5 3859 aa13.91□□□□□ -0.18
SYNE4-201ENST00000324444 IGHV3-11P01762 117 aa13.91□□□□□ -0.18
SYNE4-201ENST00000324444 FAM106AQ4KMX7 169 aa13.91□□□□□ -0.18
SYNE4-201ENST00000324444 PATE2Q6UY27 113 aa13.91□□□□□ -0.18
SYNE4-201ENST00000324444 TXNDC17Q9BRA2 123 aa13.91□□□□□ -0.18
SYNE4-201ENST00000324444 CLPSL1A2RUU4 121 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 NDUFS6O75380 124 aaKnown RBP13.9□□□□□ -0.18
SYNE4-201ENST00000324444 KIAA0141Q14154 515 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-201ENST00000324444 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 MIR17HGQ75NE6 70 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 SUN5Q8TC36 379 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 TMEM190Q8WZ59 177 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 METTL26Q96S19 204 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 SHANK2-AS3Q9BTD1 123 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 SLC25A39Q9BZJ4 359 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-201ENST00000324444 EIF5A2Q9GZV4 153 aaKnown RBP13.9□□□□□ -0.18
SYNE4-201ENST00000324444 ARL2-SNX15V9GYD0 113 aa13.9□□□□□ -0.18
SYNE4-201ENST00000324444 RBFOX3A6NFN3 312 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 OR7C2O60412 319 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 HSPB1P04792 205 aaKnown RBP13.89□□□□□ -0.19
SYNE4-201ENST00000324444 GUK1Q16774 197 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 IQCF2Q8IXL9 164 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 SLC7A5P1Q8MH63 180 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 WIPF2Q8TF74 440 aaPredicted RBP13.89□□□□□ -0.19
SYNE4-201ENST00000324444 C4orf3Q8WVX3 66 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 GPR82Q96P67 336 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 OR51M1Q9H341 326 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 RNF114Q9Y508 228 aa13.89□□□□□ -0.19
SYNE4-201ENST00000324444 ARL14EPLP0DKL9 152 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 ZP3P21754 424 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 NPPCP23582 126 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 GCHFRP30047 84 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 BMI1P35226 326 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 FGF8P55075 233 aaPredicted RBP13.88□□□□□ -0.19
SYNE4-201ENST00000324444 PRR31Q5SQ13 230 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 SSX7Q7RTT5 188 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 BPIFA4PQ86YQ2 179 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 GPHB5Q86YW7 130 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 PAXXQ9BUH6 204 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 NKX6-2Q9C056 277 aaPredicted RBP13.88□□□□□ -0.19
SYNE4-201ENST00000324444 TMEM14CQ9P0S9 112 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 GNG13Q9P2W3 67 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 VAX2Q9UIW0 290 aa13.88□□□□□ -0.19
SYNE4-201ENST00000324444 A0A1B0GV50 99 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 PPP5D1E7EU14 171 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 H3BRN7 92 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 HMGB3O15347 200 aaKnown RBP13.87□□□□□ -0.19
SYNE4-201ENST00000324444 USF2Q15853 346 aaPredicted RBP13.87□□□□□ -0.19
SYNE4-201ENST00000324444 RPEL1Q2QD12 228 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 C1orf194Q5T5A4 169 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 C10orf99Q6UWK7 81 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 LCNL1Q6ZST4 164 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 UHRF2Q96PU4 802 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 ZFAND3Q9H8U3 227 aa13.87□□□□□ -0.19
SYNE4-201ENST00000324444 A0A1W2PS18 150 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 K7EMT4 169 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 BCL2P10415 239 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 RPL7P18124 248 aaKnown RBP13.86□□□□□ -0.19
SYNE4-201ENST00000324444 S100A1P23297 94 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 CCL20P78556 96 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 ZNF506Q5JVG8 444 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 SPATA31B1PQ5VZV4 182 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 GRAMD2BQ96HH9 432 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 CITED4Q96RK1 184 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 SLC25A2Q9BXI2 301 aa13.86□□□□□ -0.19
SYNE4-201ENST00000324444 TMEM231Q9H6L2 316 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms