RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 C19orf12Q9NSK7 152 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 IDI2-AS1Q9NZ38 188 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 TBL2Q9Y4P3 447 aaKnown RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 LINC00312Q9Y6C7 94 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 FREM2Q5SZK8 3169 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 FAM186AA6NE01 2351 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 URB1O60287 2271 aaKnown RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 MUC6Q6W4X9 2439 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 IGHV1-69-2A0A0G2JMI3 117 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 IGSF23A1L1A6 192 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 C17orf98A8MV24 154 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 LINC00587B1AMM8 73 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 UMAD1C9J7I0 102 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 M0R1X1 148 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 RBFOX2O43251 390 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 NFYBP25208 207 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 G6PCP35575 357 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 UQCRFS1P47985 274 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 DYNLT3P51808 116 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 SUB1P53999 127 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 RAB2AP61019 212 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 UBE2KP61086 200 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 RPL30P62888 115 aaKnown RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 RPL31P62899 125 aaKnown RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 EIF4EBP1Q13541 118 aaPredicted RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 CLINT1Q14677 625 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 S100A7AQ86SG5 101 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 ZCCHC24Q8N2G6 241 aaKnown RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 MUC15Q8N387 334 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 FAM216BQ8N7L0 139 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 OR2G3Q8NGZ4 309 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 CIB3Q96Q77 187 aaPredicted RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 TSNAXQ99598 290 aaKnown RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 LINC00574Q9H8X3 128 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 XCL2Q9UBD3 114 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 PTPRZ1P23471 2315 aaPredicted RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 CEBPZOSA8MTT3 80 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 KRTAP4-16G5E9R7 235 aaPredicted RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 SOX15O60248 233 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 CST7O76096 145 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 S1PR2O95136 353 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 FSTL3O95633 263 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 HRASP01112 189 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 TFPI2P48307 235 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 RAB4BP61018 213 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 TNFRSF9Q07011 255 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 ATP6V1FQ16864 119 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 CT45A1Q5HYN5 189 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 SPANXN5Q5MJ07 72 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 LYG1Q8N1E2 194 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 OR4S2Q8NH73 311 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 CT45A3Q8NHU0 189 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 H1FXQ92522 213 aaKnown RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 NARS2Q96I59 477 aaKnown RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM101Q96IK0 257 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF714Q96N38 554 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 WFDC1Q9HC57 220 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 KAAG1Q9UBP8 84 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 RPUSD1Q9UJJ7 312 aaKnown RBP2.81□□□□□ -1.96
SMCO3-201ENST00000316048 AGRNO00468 2067 aa2.81□□□□□ -1.96
SMCO3-201ENST00000316048 GVINP1Q7Z2Y8 2422 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 SHANK1Q9Y566 2161 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 SVILO95425 2214 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM218A2RU14 115 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF98A6NK75 572 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 RNASEK-C17orf49H0YIS7 233 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 H3BP45 60 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 IFNA17P01571 189 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 IGHV3-7P01780 117 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 APOC3P02656 99 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 IAPPP10997 89 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 ATP6V0CP27449 155 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 PPOXP50336 477 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 FGF8P55075 233 aaPredicted RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 SERF2P84101 59 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF616Q08AN1 781 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 PEA15Q15121 130 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 PSG3Q16557 428 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 RTL8BQ17RB0 113 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 RPL39P5Q59GN2 51 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 AKR1C8PQ5T2L2 129 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 DUX4L9Q6RFH8 374 aaPredicted RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 DPPA3Q6W0C5 159 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 HEPN1Q6WQI6 88 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 LINC00173Q6ZV60 143 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 LFNGQ8NES3 379 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 OR10P1Q8NGE3 313 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 OR52E5Q8NH55 327 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 LINC00052Q96N35 136 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 PBDC1Q9BVG4 233 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 IFI27L2Q9H2X8 130 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 KPTNQ9Y664 436 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 URGCP-MRPS24S4R325 110 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 CHD3Q12873 2000 aaKnown RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 DYSFO75923 2080 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 CEP250Q9BV73 2442 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 F8W036 122 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 M0QXV9 152 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 HBE1P02100 147 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 METTL15P1P0C7V9 234 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms