RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 RXFP4Q8TDU9 374 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 SLC25A2Q9BXI2 301 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 SMDT1Q9H4I9 107 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 IGHV3-35A0A0C4DH35 117 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 TMEM218A2RU14 115 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 ARL3P36405 182 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 TAGLN2P37802 199 aaKnown RBP17.45■□□□□ 0.38
IRF3-201ENST00000309877 RELQ04864 619 aaPredicted RBP17.45■□□□□ 0.38
IRF3-201ENST00000309877 ICAM4Q14773 271 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 VAX2Q9UIW0 290 aa17.45■□□□□ 0.38
IRF3-201ENST00000309877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.44■□□□□ 0.38
IRF3-201ENST00000309877 PPP5D1E7EU14 171 aa17.44■□□□□ 0.38
IRF3-201ENST00000309877 FAM167A-AS1Q96KT0 104 aa17.44■□□□□ 0.38
IRF3-201ENST00000309877 LINC00052Q96N35 136 aa17.44■□□□□ 0.38
IRF3-201ENST00000309877 SLC25A39Q9BZJ4 359 aaPredicted RBP17.44■□□□□ 0.38
IRF3-201ENST00000309877 C9JQL5 133 aa17.43■□□□□ 0.38
IRF3-201ENST00000309877 USF2Q15853 346 aaPredicted RBP17.43■□□□□ 0.38
IRF3-201ENST00000309877 ZNF343Q6P1L6 599 aa17.43■□□□□ 0.38
IRF3-201ENST00000309877 STXBP6Q8NFX7 210 aa17.43■□□□□ 0.38
IRF3-201ENST00000309877 TMEM167BQ9NRX6 74 aa17.43■□□□□ 0.38
IRF3-201ENST00000309877 PAGE4O60829 102 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 ZP3P21754 424 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 ZNF503Q96F45 646 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 PAXXQ9BUH6 204 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 OR51M1Q9H341 326 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 BMPR1BO00238 502 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 HSPB1P04792 205 aaKnown RBP17.42■□□□□ 0.38
IRF3-201ENST00000309877 RPLP1P05386 114 aaKnown RBP17.42■□□□□ 0.38
IRF3-201ENST00000309877 SFTA3P0C7M3 94 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 UBE2G2P60604 165 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 FAM209BQ5JX69 171 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 TOMM20LQ6UXN7 152 aa17.42■□□□□ 0.38
IRF3-201ENST00000309877 OR10J4P0C629 311 aa17.41■□□□□ 0.38
IRF3-201ENST00000309877 UBE2L3P68036 154 aaKnown RBP17.41■□□□□ 0.38
IRF3-201ENST00000309877 LEMD1Q68G75 181 aa17.41■□□□□ 0.38
IRF3-201ENST00000309877 SHANK2-AS3Q9BTD1 123 aa17.41■□□□□ 0.38
IRF3-201ENST00000309877 SLC35B3Q9H1N7 401 aa17.41■□□□□ 0.38
IRF3-201ENST00000309877 RABAC1Q9UI14 185 aa17.41■□□□□ 0.38
IRF3-201ENST00000309877 TRBV12-3P01733 135 aa17.4■□□□□ 0.38
IRF3-201ENST00000309877 S100A7P31151 101 aa17.4■□□□□ 0.38
IRF3-201ENST00000309877 KIAA0141Q14154 515 aaPredicted RBP17.4■□□□□ 0.38
IRF3-201ENST00000309877 CST9LP1Q5W188 147 aa17.4■□□□□ 0.38
IRF3-201ENST00000309877 KLHDC1Q8N7A1 406 aa17.4■□□□□ 0.38
IRF3-201ENST00000309877 OR5B12Q96R08 314 aa17.4■□□□□ 0.38
IRF3-201ENST00000309877 BAHCC1Q9P281 2608 aa17.4■□□□□ 0.38
IRF3-201ENST00000309877 F8W036 122 aa17.39■□□□□ 0.37
IRF3-201ENST00000309877 H3BRN7 92 aa17.39■□□□□ 0.37
IRF3-201ENST00000309877 PYYP10082 97 aa17.39■□□□□ 0.37
IRF3-201ENST00000309877 MEF2BQ02080 365 aaPredicted RBP17.39■□□□□ 0.37
IRF3-201ENST00000309877 RNF152Q8N8N0 203 aa17.39■□□□□ 0.37
IRF3-201ENST00000309877 SRP19P09132 144 aaKnown RBP17.39■□□□□ 0.37
IRF3-201ENST00000309877 ZNF414Q96IQ9 312 aa17.39■□□□□ 0.37
IRF3-201ENST00000309877 ZFAND3Q9H8U3 227 aa17.39■□□□□ 0.37
IRF3-201ENST00000309877 PEF1Q9UBV8 284 aaKnown RBP17.39■□□□□ 0.37
IRF3-201ENST00000309877 IGHV3OR16-8A0A075B7F1 116 aa17.38■□□□□ 0.37
IRF3-201ENST00000309877 CRLF1O75462 422 aa17.38■□□□□ 0.37
IRF3-201ENST00000309877 CEBPGP53567 150 aa17.38■□□□□ 0.37
IRF3-201ENST00000309877 MYOZ3Q8TDC0 251 aa17.38■□□□□ 0.37
IRF3-201ENST00000309877 ZNF98A6NK75 572 aa17.37■□□□□ 0.37
IRF3-201ENST00000309877 C11orf94C9JXX5 98 aa17.37■□□□□ 0.37
IRF3-201ENST00000309877 GGCTO75223 188 aaKnown RBP17.37■□□□□ 0.37
IRF3-201ENST00000309877 OR4F5Q8NH21 305 aa17.37■□□□□ 0.37
IRF3-201ENST00000309877 SUN5Q8TC36 379 aa17.37■□□□□ 0.37
IRF3-201ENST00000309877 OR4F4Q96R69 305 aa17.37■□□□□ 0.37
IRF3-201ENST00000309877 C16orf95Q9H693 158 aa17.37■□□□□ 0.37
IRF3-201ENST00000309877 RNF24Q9Y225 148 aa17.37■□□□□ 0.37
IRF3-201ENST00000309877 TCF21O43680 179 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 CD81P60033 236 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 UBE2E2Q96LR5 201 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 TXNDC17Q9BRA2 123 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 SEC11CQ9BY50 192 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 YTHDF2Q9Y5A9 579 aaKnown RBP17.36■□□□□ 0.37
IRF3-201ENST00000309877 FAM74A7A6NL05 159 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 NDUFA4O00483 81 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 BPIFA4PQ86YQ2 179 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 FXYD5Q96DB9 178 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 C20orf24Q9BUV8 137 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 TMEM14CQ9P0S9 112 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 ARL2-SNX15V9GYD0 113 aa17.36■□□□□ 0.37
IRF3-201ENST00000309877 APOC3P02656 99 aa17.35■□□□□ 0.37
IRF3-201ENST00000309877 GP9P14770 177 aa17.35■□□□□ 0.37
IRF3-201ENST00000309877 ADCYAP1P18509 176 aa17.35■□□□□ 0.37
IRF3-201ENST00000309877 ATP5G3P48201 142 aa17.35■□□□□ 0.37
IRF3-201ENST00000309877 SOHLH1Q5JUK2 328 aa17.35■□□□□ 0.37
IRF3-201ENST00000309877 CYB561D1Q8N8Q1 229 aa17.35■□□□□ 0.37
IRF3-201ENST00000309877 METTL26Q96S19 204 aa17.35■□□□□ 0.37
IRF3-201ENST00000309877 HIVEP1P15822 2718 aa17.34■□□□□ 0.37
IRF3-201ENST00000309877 MTORP42345 2549 aa17.34■□□□□ 0.37
IRF3-201ENST00000309877 LGALS1P09382 135 aaKnown RBP17.34■□□□□ 0.37
IRF3-201ENST00000309877 SNRPCP09234 159 aaKnown RBP17.33■□□□□ 0.37
IRF3-201ENST00000309877 NBEAP1P0C6P0 100 aa17.33■□□□□ 0.37
IRF3-201ENST00000309877 NPPCP23582 126 aa17.33■□□□□ 0.37
IRF3-201ENST00000309877 LINC01006Q8NI28 216 aa17.33■□□□□ 0.37
IRF3-201ENST00000309877 BLNKQ8WV28 456 aa17.33■□□□□ 0.37
IRF3-201ENST00000309877 PDE6DO43924 150 aa17.32■□□□□ 0.36
IRF3-201ENST00000309877 NDUFS6O75380 124 aaKnown RBP17.32■□□□□ 0.36
IRF3-201ENST00000309877 C10orf91Q5T1B1 145 aa17.32■□□□□ 0.36
IRF3-201ENST00000309877 OR4F17Q8NGA8 305 aa17.32■□□□□ 0.36
IRF3-201ENST00000309877 A0A1W2PRE2 83 aa17.32■□□□□ 0.36
IRF3-201ENST00000309877 CLPSL1A2RUU4 121 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms