RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 TRAV5A0A0B4J249 113 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 HOXA5P20719 270 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 LINC00205P59089 165 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 DMRTA1Q5VZB9 504 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 CLRN3Q8NCR9 226 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 OR10AG1Q8NH19 301 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 PRO1933Q9H354 126 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 NOTCH3Q9UM47 2321 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 GREB1LQ9C091 1923 aaPredicted RBP5.79□□□□□ -1.48
RAG1-201ENST00000299440 DOCK4Q8N1I0 1966 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 TRAV3A0A0B4J244 114 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 HLA-DQA1P01909 254 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 SPINK13Q1W4C9 94 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 TMEM136Q6ZRR5 245 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 C5orf24Q7Z6I8 188 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 MRPL18Q9H0U6 180 aaKnown RBP5.79□□□□□ -1.48
RAG1-201ENST00000299440 PSG8Q9UQ74 426 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 RALGAPA2Q2PPJ7 1873 aa5.79□□□□□ -1.48
RAG1-201ENST00000299440 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 RBMY1BA6NDE4 496 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 RBMY1EA6NEQ0 496 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 CDK2AP2O75956 126 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 RBMY1DP0C7P1 496 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 RBMY1A1P0DJD3 496 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 RBMY1CP0DJD4 496 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 IGHV4-38-2P0DP08 117 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 RND3P61587 244 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 S100A7L2Q5SY68 101 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 CST9LQ9H4G1 147 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 PLSCR2Q9NRY7 297 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 KIAA1671Q9BY89 1806 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 IGHV3-64A0A075B6Q5 118 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 TGIF2-C20orf24A0A0A6YYL0 155 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 FBLL1A6NHQ2 334 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 LINC00158P58513 81 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 ZNF876PQ49A33 203 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 C9orf139Q6ZV77 190 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 PARLQ9H300 379 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 DKK4Q9UBT3 224 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 A0A1B0GUS0 222 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 IGHV2-5P01817 119 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 RPL24P83731 157 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 C1QL4Q86Z23 238 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 A0A1B0GUT8 65 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 LINC00862A6NCI5 91 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 ALX3O95076 343 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 CCL1P22362 96 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 EVI2AP22794 236 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 EXOC3-AS1Q8N2X6 119 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 COQ2Q96H96 371 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 FNDC1Q4ZHG4 1894 aaPredicted RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 PTPN13Q12923 2485 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 ATP5G3P48201 142 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 SNRPEP62304 92 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 Q8TAT8 98 aa5.78□□□□□ -1.48
RAG1-201ENST00000299440 RPP21Q9H633 154 aaKnown RBP5.78□□□□□ -1.48
RAG1-201ENST00000299440 A0A0J9YY99 117 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 A6NDN8 102 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 GAGE12JA6NER3 117 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 SHISA9B4DS77 424 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 M0R143 59 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 GP9P14770 177 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 SSBP2P81877 361 aaPredicted RBP5.77□□□□□ -1.48
RAG1-201ENST00000299440 GAGE1Q13065 139 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 GAGE4Q13068 117 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 GAGE5Q13069 117 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 GAGE13Q4V321 117 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 OR5A1Q8NGJ0 315 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 IGFBPL1Q8WX77 278 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 Q9HAA7 133 aa5.77□□□□□ -1.48
RAG1-201ENST00000299440 CACNA1DQ01668 2161 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 SLC17A3O00476 420 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 NDUFA3O95167 84 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 MT-ND6P03923 174 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 PIFOQ8TCI5 191 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 KLK9Q9UKQ9 250 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 PAM16Q9Y3D7 125 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 LYPD3O95274 346 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 TMEM218A2RU14 115 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 CBLN2Q8IUK8 224 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 STPG2Q8N412 459 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 DOCK10Q96BY6 2186 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 SFRP2Q96HF1 295 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 LINC00477Q96M19 166 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 ZNF345Q14585 488 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 IGF2BP2-AS1Q96M15 143 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 NPDC1Q9NQX5 325 aaPredicted RBP5.77□□□□□ -1.49
RAG1-201ENST00000299440 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 ZNF25P17030 456 aaPredicted RBP5.77□□□□□ -1.49
RAG1-201ENST00000299440 RCC1LQ96I51 464 aaKnown RBP5.77□□□□□ -1.49
RAG1-201ENST00000299440 LIME1Q9H400 295 aa5.77□□□□□ -1.49
RAG1-201ENST00000299440 APOHP02749 345 aaPredicted RBP5.76□□□□□ -1.49
RAG1-201ENST00000299440 IGFBP3P17936 291 aaPredicted RBP5.76□□□□□ -1.49
RAG1-201ENST00000299440 OR11H2Q8NH07 326 aa5.76□□□□□ -1.49
RAG1-201ENST00000299440 JPT2Q9H910 190 aa5.76□□□□□ -1.49
RAG1-201ENST00000299440 ZNF98A6NK75 572 aa5.76□□□□□ -1.49
RAG1-201ENST00000299440 DKK1O94907 266 aa5.76□□□□□ -1.49
RAG1-201ENST00000299440 IGKV1-16P04430 117 aa5.76□□□□□ -1.49
RAG1-201ENST00000299440 PROK2Q9HC23 129 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms