RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 TMEM242Q9NWH2 141 aa14.03□□□□□ -0.16
CDCP1-201ENST00000296129 MRPL16Q9NX20 251 aaKnown RBP14.03□□□□□ -0.16
CDCP1-201ENST00000296129 VOPP1Q96AW1 172 aa14.03□□□□□ -0.16
CDCP1-201ENST00000296129 TNFSF13O75888 250 aa14.03□□□□□ -0.16
CDCP1-201ENST00000296129 GLRX5Q86SX6 157 aa14.03□□□□□ -0.16
CDCP1-201ENST00000296129 ICE1Q9Y2F5 2266 aa14.03□□□□□ -0.16
CDCP1-201ENST00000296129 TRBV7-1A0A0A6YYK4 115 aa14.03□□□□□ -0.16
CDCP1-201ENST00000296129 RNASE2P10153 161 aaKnown RBP14.03□□□□□ -0.16
CDCP1-201ENST00000296129 SRSF1Q07955 248 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDCP1-201ENST00000296129 MRPS16Q9Y3D3 137 aaKnown RBP14.03□□□□□ -0.16
CDCP1-201ENST00000296129 E9PQ18 207 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 HBDP02042 147 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 TCRAP04437 139 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 TMEM155Q4W5P6 130 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 CYB5R2Q6BCY4 276 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 TRGV11A0A075B6L2 103 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 MLANAQ16655 118 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 Q6ZR03 302 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 LINC01551Q86U37 167 aa14.02□□□□□ -0.16
CDCP1-201ENST00000296129 IGFL3Q6UXB1 125 aa14.02□□□□□ -0.17
CDCP1-201ENST00000296129 NIT1Q86X76 327 aa14.02□□□□□ -0.17
CDCP1-201ENST00000296129 TOMM7Q9P0U1 55 aa14.02□□□□□ -0.17
CDCP1-201ENST00000296129 ATP5L2Q7Z4Y8 100 aa14.02□□□□□ -0.17
CDCP1-201ENST00000296129 DPH3Q96FX2 82 aa14.02□□□□□ -0.17
CDCP1-201ENST00000296129 JKAMPQ9P055 326 aa14.02□□□□□ -0.17
CDCP1-201ENST00000296129 SPSB3Q6PJ21 355 aa14.02□□□□□ -0.17
CDCP1-201ENST00000296129 F2Z2F3 143 aa14.01□□□□□ -0.17
CDCP1-201ENST00000296129 PEF1Q9UBV8 284 aaKnown RBP14.01□□□□□ -0.17
CDCP1-201ENST00000296129 SAA4P35542 130 aa14.01□□□□□ -0.17
CDCP1-201ENST00000296129 WDR86Q86TI4 376 aa14.01□□□□□ -0.17
CDCP1-201ENST00000296129 MPDZO75970 2070 aa14.01□□□□□ -0.17
CDCP1-201ENST00000296129 COLCA2A8K830 154 aa14.01□□□□□ -0.17
CDCP1-201ENST00000296129 IGKV3D-20A0A0C4DH25 116 aa14.01□□□□□ -0.17
CDCP1-201ENST00000296129 C3orf36Q3SXR2 165 aa14□□□□□ -0.17
CDCP1-201ENST00000296129 PHF3Q92576 2039 aaKnown RBP14□□□□□ -0.17
CDCP1-201ENST00000296129 IFI27P40305 119 aaPredicted RBP14□□□□□ -0.17
CDCP1-201ENST00000296129 C21orf62-AS1Q17RA5 79 aa14□□□□□ -0.17
CDCP1-201ENST00000296129 NXT2Q9NPJ8 142 aaKnown RBP14□□□□□ -0.17
CDCP1-201ENST00000296129 IGFL4Q6B9Z1 124 aa14□□□□□ -0.17
CDCP1-201ENST00000296129 PPBPP02775 128 aa14□□□□□ -0.17
CDCP1-201ENST00000296129 C1orf147Q96MC9 270 aaPredicted RBP14□□□□□ -0.17
CDCP1-201ENST00000296129 TRBV24-1A0A075B6N3 115 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 TOMM40O96008 361 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 SAP30O75446 220 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 DUX4L9Q6RFH8 374 aaPredicted RBP13.99□□□□□ -0.17
CDCP1-201ENST00000296129 VCX2Q9H322 139 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 UBE2CO00762 179 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 LMO1P25800 156 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 RUSC1-AS1Q66K80 236 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 DTX1Q86Y01 620 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 Q8TCH9 128 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 PRTN3P24158 256 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 ZNF329Q86UD4 541 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 Q8TAT8 98 aa13.99□□□□□ -0.17
CDCP1-201ENST00000296129 CHCHD1Q96BP2 118 aaKnown RBP13.99□□□□□ -0.17
CDCP1-201ENST00000296129 GTSCR1Q86UQ5 136 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 FOXL1Q12952 345 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 LINC01356Q8N9X3 169 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 ESPL1Q14674 2120 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 NUP210Q8TEM1 1887 aaPredicted RBP13.98□□□□□ -0.17
CDCP1-201ENST00000296129 TDGF1P13385 188 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 ANAPC10Q9UM13 185 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 ITGB1BP1O14713 200 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 SH2D1AO60880 128 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 LYZL1Q6UWQ5 148 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 CYSLTR1Q9Y271 337 aa13.98□□□□□ -0.17
CDCP1-201ENST00000296129 EP300Q09472 2414 aaPredicted RBP13.97□□□□□ -0.17
CDCP1-201ENST00000296129 FAM223BA6NKX1 122 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 NCR2O95944 276 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 CNTFRP26992 372 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 FAM223AQ8IWN6 122 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 GATA4P43694 442 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 PSG3Q16557 428 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 A0A1W2PPI3 338 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 SLC25A16P16260 332 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 CEACAM8P31997 349 aaPredicted RBP13.97□□□□□ -0.17
CDCP1-201ENST00000296129 ORMDL2Q53FV1 153 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 TRGV4A0A0C4DH28 118 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 DNAL4O96015 105 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 PI4KAP42356 2102 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 HIST1H2BLQ99880 126 aa13.97□□□□□ -0.17
CDCP1-201ENST00000296129 ZNF688P0C7X2 276 aa13.96□□□□□ -0.17
CDCP1-201ENST00000296129 DPM2O94777 84 aa13.96□□□□□ -0.17
CDCP1-201ENST00000296129 APOMO95445 188 aa13.96□□□□□ -0.17
CDCP1-201ENST00000296129 ZNF138P52744 262 aa13.96□□□□□ -0.17
CDCP1-201ENST00000296129 LCN12Q6JVE5 192 aa13.96□□□□□ -0.17
CDCP1-201ENST00000296129 BEND2Q8NDZ0 799 aa13.96□□□□□ -0.17
CDCP1-201ENST00000296129 TMEM190Q8WZ59 177 aa13.96□□□□□ -0.17
CDCP1-201ENST00000296129 CHTOPQ9Y3Y2 248 aaKnown RBP13.96□□□□□ -0.17
CDCP1-201ENST00000296129 RTTNQ86VV8 2226 aa13.96□□□□□ -0.18
CDCP1-201ENST00000296129 D6R8Y8 96 aa13.96□□□□□ -0.18
CDCP1-201ENST00000296129 RSPO1Q2MKA7 263 aaPredicted RBP13.96□□□□□ -0.18
CDCP1-201ENST00000296129 C9orf139Q6ZV77 190 aa13.96□□□□□ -0.18
CDCP1-201ENST00000296129 USMG5Q96IX5 58 aa13.96□□□□□ -0.18
CDCP1-201ENST00000296129 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 NOTCH4Q99466 2003 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 HIST3H2BBQ8N257 126 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 C17orf58Q2M2W7 97 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 TRAV8-1A0A0A6YYK1 113 aa13.95□□□□□ -0.18
CDCP1-201ENST00000296129 FCN3O75636 299 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms