RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 VGLL1Q99990 258 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 DSPP15924 2871 aaKnown RBP8.26□□□□□ -1.09
CLDN1-201ENST00000295522 DKK1O94907 266 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 MPV17P39210 176 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 GOLT1AQ6ZVE7 132 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 RALYQ9UKM9 306 aaKnown RBP8.26□□□□□ -1.09
CLDN1-201ENST00000295522 SSUH2Q9Y2M2 353 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 AGFG2O95081 481 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 NRN1LQ496H8 165 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 FAM231DQ6ZW35 169 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 OR4X2Q8NGF9 303 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 ZNF479Q96JC4 524 aa8.26□□□□□ -1.09
CLDN1-201ENST00000295522 COLQQ9Y215 455 aaPredicted RBP8.26□□□□□ -1.09
CLDN1-201ENST00000295522 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 SMKR1H3BMG3 65 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 LTAP01374 205 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 ANXA2RQ3ZCQ2 193 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 PEAR1Q5VY43 1037 aaPredicted RBP8.25□□□□□ -1.09
CLDN1-201ENST00000295522 SPAG8Q99932 426 aaPredicted RBP8.25□□□□□ -1.09
CLDN1-201ENST00000295522 IFI27L2Q9H2X8 130 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 PLSCR4Q9NRQ2 329 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 ZGRF1Q86YA3 2104 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 A0A1B0GUT8 65 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 D6R8Y8 96 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 PRDX2P32119 198 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 ERVK11-1P61568 191 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 ERHP84090 104 aaKnown RBP8.25□□□□□ -1.09
CLDN1-201ENST00000295522 EIF4EBP1Q13541 118 aaPredicted RBP8.25□□□□□ -1.09
CLDN1-201ENST00000295522 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 OR9G4Q8NGQ1 327 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 INSIG2Q9Y5U4 225 aa8.25□□□□□ -1.09
CLDN1-201ENST00000295522 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 IGKV1-16P04430 117 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
CLDN1-201ENST00000295522 FAM201AQ5SY85 155 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 TGFAP01135 160 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 HCP5Q6MZN7 132 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 GTSCR1Q86UQ5 136 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 ZNF418Q8TF45 676 aaPredicted RBP8.24□□□□□ -1.09
CLDN1-201ENST00000295522 MRAP2Q96G30 205 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 BOKQ9UMX3 212 aaPredicted RBP8.24□□□□□ -1.09
CLDN1-201ENST00000295522 MRPS17Q9Y2R5 130 aaKnown RBP8.24□□□□□ -1.09
CLDN1-201ENST00000295522 RIGQ13278 110 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 GAGE13Q4V321 117 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 FAM167A-AS1Q96KT0 104 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 IMMP1LQ96LU5 166 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 PRNDQ9UKY0 176 aa8.24□□□□□ -1.09
CLDN1-201ENST00000295522 APOMO95445 188 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 Q71RC1 249 aaPredicted RBP8.23□□□□□ -1.09
CLDN1-201ENST00000295522 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 CNEP1R1Q8N9A8 125 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 SYT8Q8NBV8 401 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 KLF14Q8TD94 323 aaPredicted RBP8.23□□□□□ -1.09
CLDN1-201ENST00000295522 MRPL32Q9BYC8 188 aaKnown RBP8.23□□□□□ -1.09
CLDN1-201ENST00000295522 TRGV8A0A0C4DH27 118 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 FNDC10F2Z333 226 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 CNIH1O95406 144 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 EXOC3-AS1Q8N2X6 119 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 CHAC1Q9BUX1 264 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 DEFB127Q9H1M4 99 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 PKDREJQ9NTG1 2253 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 DCHS1Q96JQ0 3298 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 LOC107984156A0A0G2JMH3 177 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 FGF6P10767 208 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 SCGB1A1P11684 91 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 CD69Q07108 199 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 MRPL14Q6P1L8 145 aaKnown RBP8.23□□□□□ -1.09
CLDN1-201ENST00000295522 C1orf229Q6ZS94 237 aaPredicted RBP8.23□□□□□ -1.09
CLDN1-201ENST00000295522 ARL17AQ8IVW1 177 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 NDFIP1Q9BT67 221 aa8.23□□□□□ -1.09
CLDN1-201ENST00000295522 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
CLDN1-201ENST00000295522 CXCL12P48061 93 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 AMN1Q8IY45 258 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 CD177Q8N6Q3 437 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 PPP1R35Q8TAP8 253 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 HIST1H4GQ99525 98 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 Q9H3A6 140 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 TMEM160Q9NX00 188 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 IGLV3-19P01714 112 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 LYZP61626 148 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 HARBI1Q96MB7 349 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 CALYQ9NYX4 217 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 SPTBN2O15020 2390 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 PATE3B3GLJ2 98 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 H3BVH4 76 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 GATA3P23771 443 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
CLDN1-201ENST00000295522 TMEM14BQ9NUH8 114 aa8.22□□□□□ -1.09
CLDN1-201ENST00000295522 NPIPB6E9PJ23 425 aa8.21□□□□□ -1.09
CLDN1-201ENST00000295522 DLL1O00548 723 aa8.21□□□□□ -1.09
CLDN1-201ENST00000295522 CKS2P33552 79 aa8.21□□□□□ -1.09
CLDN1-201ENST00000295522 ITLN1Q8WWA0 313 aa8.21□□□□□ -1.09
CLDN1-201ENST00000295522 FXYD5Q96DB9 178 aa8.21□□□□□ -1.09
CLDN1-201ENST00000295522 ANAPC13Q9BS18 74 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms