RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RNF5Q99942 180 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 HBDP02042 147 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 SIP14410 1827 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 CACNA1DQ01668 2161 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 LINC00614P0C842 121 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 IGFL4Q6B9Z1 124 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 RNF144BQ7Z419 303 aa14.14□□□□□ -0.15
SHANK1-201ENST00000293441 TRAV2A0A0B4J234 112 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 NXT2Q9NPJ8 142 aaKnown RBP14.13□□□□□ -0.15
SHANK1-201ENST00000293441 YLPM1P49750 1951 aaKnown RBP14.13□□□□□ -0.15
SHANK1-201ENST00000293441 MPZP25189 248 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 SIGLEC9Q9Y336 463 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 IGHV4-39P01824 125 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 ORMDL2Q53FV1 153 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 MYO7BQ6PIF6 2116 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 MPDZO75970 2070 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 GBF1Q92538 1859 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 DMRT1Q9Y5R6 373 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 ZNF815PA8K554 130 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 NRN1Q9NPD7 142 aa14.13□□□□□ -0.15
SHANK1-201ENST00000293441 DPM2O94777 84 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 USMG5Q96IX5 58 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 TRGV9Q99603 122 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 PLXNA3P51805 1871 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 LINC00473A8K010 186 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 FAM223BA6NKX1 122 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 FAM223AQ8IWN6 122 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 ZNF581Q9P0T4 197 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 PRR31Q5SQ13 230 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 SFTA2Q6UW10 78 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 PSCAO43653 123 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 RPRMLQ8N4K4 120 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 RNF114Q9Y508 228 aa14.12□□□□□ -0.15
SHANK1-201ENST00000293441 MED12Q93074 2177 aa14.11□□□□□ -0.15
SHANK1-201ENST00000293441 PI4KAP42356 2102 aa14.11□□□□□ -0.15
SHANK1-201ENST00000293441 CD5P06127 495 aa14.11□□□□□ -0.15
SHANK1-201ENST00000293441 MSMBP08118 114 aa14.11□□□□□ -0.15
SHANK1-201ENST00000293441 Q71RC1 249 aaPredicted RBP14.11□□□□□ -0.15
SHANK1-201ENST00000293441 TSKUQ8WUA8 353 aa14.11□□□□□ -0.15
SHANK1-201ENST00000293441 CKS1BP61024 79 aa14.11□□□□□ -0.15
SHANK1-201ENST00000293441 LINC00158P58513 81 aa14.11□□□□□ -0.15
SHANK1-201ENST00000293441 A8MXK9 166 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 PPBPP02775 128 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 IGKV1-5P01602 117 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 TMEM249Q2WGJ8 235 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 Q8TAT8 98 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 RNF166Q96A37 237 aaPredicted RBP14.1□□□□□ -0.15
SHANK1-201ENST00000293441 A0A1B0GWB2 263 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 C10orf126Q8N4M7 172 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 ZNF138P52744 262 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 NCR2O95944 276 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 SYNJ2BPP57105 145 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 PHF3Q92576 2039 aaKnown RBP14.1□□□□□ -0.15
SHANK1-201ENST00000293441 TMEM155Q4W5P6 130 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 ATRAIDQ6UW56 229 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 NIT1Q86X76 327 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 TMEM170AQ8WVE7 144 aa14.1□□□□□ -0.15
SHANK1-201ENST00000293441 FOXL1Q12952 345 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 A6NNC1 897 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 ZNF876PQ49A33 203 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 ZNRD1Q9P1U0 126 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 NDUFS8O00217 210 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 TDGF1P3P51864 188 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 HGFACQ04756 655 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 LCN12Q6JVE5 192 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 PAX2Q02962 417 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 TMEM95Q3KNT9 176 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 LHFPL1Q86WI0 220 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 DOCK8Q8NF50 2099 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 LINC00518Q8N0U6 118 aa14.09□□□□□ -0.15
SHANK1-201ENST00000293441 NPC2P61916 151 aa14.08□□□□□ -0.15
SHANK1-201ENST00000293441 IGKCP01834 107 aa14.08□□□□□ -0.16
SHANK1-201ENST00000293441 C9orf139Q6ZV77 190 aa14.08□□□□□ -0.16
SHANK1-201ENST00000293441 RHPN1-AS1Q9BWJ2 59 aa14.08□□□□□ -0.16
SHANK1-201ENST00000293441 LAGE3Q14657 143 aa14.08□□□□□ -0.16
SHANK1-201ENST00000293441 SUPT4H1P63272 117 aaKnown RBP14.08□□□□□ -0.16
SHANK1-201ENST00000293441 RPL36AP83881 106 aaKnown RBP14.08□□□□□ -0.16
SHANK1-201ENST00000293441 RPL36ALQ969Q0 106 aaKnown RBP14.08□□□□□ -0.16
SHANK1-201ENST00000293441 PRDM13Q9H4Q3 707 aa14.08□□□□□ -0.16
SHANK1-201ENST00000293441 GNB1LQ9BYB4 327 aa14.08□□□□□ -0.16
SHANK1-201ENST00000293441 SH2D1AO60880 128 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 INSP01308 110 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 CD300EQ496F6 205 aaPredicted RBP14.07□□□□□ -0.16
SHANK1-201ENST00000293441 S100A7L2Q5SY68 101 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 AKAP6Q13023 2319 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 MBD3L1Q8WWY6 194 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 STAG3L3P0CL85 134 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 LYZL1Q6UWQ5 148 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 TCRAP04437 139 aa14.07□□□□□ -0.16
SHANK1-201ENST00000293441 TOMM40O96008 361 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 FAM169BQ8N8A8 192 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 OR5A1Q8NGJ0 315 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 LINC00477Q96M19 166 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 PRTN3P24158 256 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 TMEM86BQ8N661 226 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 NTF4P34130 210 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 NHP2Q9NX24 153 aaKnown RBP14.06□□□□□ -0.16
SHANK1-201ENST00000293441 FANCMQ8IYD8 2048 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 OVOL3O00110 214 aa14.06□□□□□ -0.16
SHANK1-201ENST00000293441 A0A1B0GV90 55 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms