RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 STAG3L3P0CL85 134 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 ORM2P19652 201 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 S100A1P23297 94 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 LYZP61626 148 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 FAM78BQ5VT40 261 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 C18orf65Q6ZTR6 163 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 OR1L4Q8NGR5 311 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 OR1B1Q8NGR6 318 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 RNF125Q96EQ8 232 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 CITED2Q99967 270 aaPredicted RBP14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 FUT9Q9Y231 359 aa14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 TSSC4Q9Y5U2 329 aaPredicted RBP14.55□□□□□ -0.08
PDLIM3-202ENST00000284770 ELOA3CA0A087WX78 387 aaPredicted RBP14.54□□□□□ -0.08
PDLIM3-202ENST00000284770 CD5P06127 495 aa14.54□□□□□ -0.08
PDLIM3-202ENST00000284770 HIST2H2BDQ6DRA6 164 aa14.54□□□□□ -0.08
PDLIM3-202ENST00000284770 TOMM20LQ6UXN7 152 aa14.54□□□□□ -0.08
PDLIM3-202ENST00000284770 PFDN5Q99471 154 aa14.54□□□□□ -0.08
PDLIM3-202ENST00000284770 DOK5Q9P104 306 aa14.54□□□□□ -0.08
PDLIM3-202ENST00000284770 COX7A2P2O60397 106 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 HYPMO75409 117 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 HSPB1P04792 205 aaKnown RBP14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 PMS2P11Q13670 270 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 GUK1Q16774 197 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 MIR17HGQ75NE6 70 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 KLHL30-AS1Q8NEE0 82 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 PBDC1Q9BVG4 233 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 ZFAND3Q9H8U3 227 aa14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 SETD2Q9BYW2 2564 aaPredicted RBP14.53□□□□□ -0.08
PDLIM3-202ENST00000284770 NDUFA4O00483 81 aa14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 KRTAP10-3P60369 221 aa14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 KRTAP24-1Q3LI83 254 aa14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 TOR2AQ5JU69 321 aa14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 C10orf113Q5VZT2 155 aa14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 MRPL32Q9BYC8 188 aaKnown RBP14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 TMPRSS5Q9H3S3 457 aa14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 TMEM231Q9H6L2 316 aa14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 MRPL27Q9P0M9 148 aaKnown RBP14.52□□□□□ -0.08
PDLIM3-202ENST00000284770 IGHV4OR15-8A0A075B7B6 117 aa14.52□□□□□ -0.09
PDLIM3-202ENST00000284770 A0A087WW49 117 aa14.52□□□□□ -0.09
PDLIM3-202ENST00000284770 USF2Q15853 346 aaPredicted RBP14.52□□□□□ -0.09
PDLIM3-202ENST00000284770 MORN5Q5VZ52 161 aa14.52□□□□□ -0.09
PDLIM3-202ENST00000284770 RNF2Q99496 336 aa14.52□□□□□ -0.09
PDLIM3-202ENST00000284770 RBFOX3A6NFN3 312 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 ARL14EPLP0DKL9 152 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 RPEL1Q2QD12 228 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 AWAT1Q58HT5 328 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 GPHB5Q86YW7 130 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 UHRF2Q96PU4 802 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 RARRES2Q99969 163 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 GNG13Q9P2W3 67 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 HIGD1AQ9Y241 93 aa14.51□□□□□ -0.09
PDLIM3-202ENST00000284770 C9JQL5 133 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 CXorf1O96002 111 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 DEFB136Q30KP8 78 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 LINC00305Q7Z4B0 112 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 OR11H1Q8NG94 326 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 EIF5A2Q9GZV4 153 aaKnown RBP14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 IGHV3OR16-8A0A075B7F1 116 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 HAGHQ16775 308 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 FAM106AQ4KMX7 169 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 ZNF506Q5JVG8 444 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 C8orf86Q6ZUL3 223 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 FAM167A-AS1Q96KT0 104 aa14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 TECRQ9NZ01 308 aaKnown RBP14.5□□□□□ -0.09
PDLIM3-202ENST00000284770 LOC102723971A0A1B0GUV8 181 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 A0A1W2PRX2 142 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 LINC01619G3V211 115 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 PSMB3P49720 205 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 UNQ9165/PRO28630Q6UXU0 137 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 OR1N2Q8NGR9 330 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 ZNF503Q96F45 646 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 LINC00052Q96N35 136 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 TREM1Q9NP99 234 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 RABAC1Q9UI14 185 aa14.49□□□□□ -0.09
PDLIM3-202ENST00000284770 C8orf88P0DMB2 117 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 BCL2P10415 239 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 ZP3P21754 424 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 HOXD3P31249 432 aaPredicted RBP14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 ICAM4Q14773 271 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 PEA15Q15121 130 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 S100A7AQ86SG5 101 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 TMEM190Q8WZ59 177 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 DPF1Q92782 380 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 C20orf24Q9BUV8 137 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 SLC25A2Q9BXI2 301 aa14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 SLC25A39Q9BZJ4 359 aaPredicted RBP14.48□□□□□ -0.09
PDLIM3-202ENST00000284770 TRAV5A0A0B4J249 113 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 TMEM218A2RU14 115 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 ADARB2-AS1A8MUL3 147 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 GCHFRP30047 84 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 TAS2R45P59539 299 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 KHDC3LQ587J8 217 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 SMDT1Q9H4I9 107 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 ZNF320A2RRD8 509 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 KRBOX1C9JBD0 128 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 PQLC2Q6ZP29 291 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 NDUFA11Q86Y39 141 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 IQCF2Q8IXL9 164 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 NARS2Q96I59 477 aaKnown RBP14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 METTL26Q96S19 204 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms