RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TMEM167BQ9NRX6 74 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 DNAJC9-AS1A6NH13 148 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 GPR183P32249 361 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 MEF2BQ02080 365 aaPredicted RBP10.95□□□□□ -0.66
SS18-201ENST00000269137 CBLN2Q8IUK8 224 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 DUX5Q96PT3 197 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 SMR3AQ99954 134 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 KLK15Q9H2R5 256 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 ARL2-SNX15V9GYD0 113 aa10.95□□□□□ -0.66
SS18-201ENST00000269137 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 A0A0G2JLM5 398 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 OR7C2O60412 319 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 PAGE4O60829 102 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 IL4P05112 153 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 PF4V1P10720 104 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 PSMB8P28062 276 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 RAB9AP51151 201 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 CLEC19AQ6UXS0 136 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 ZNF600Q6ZNG1 722 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 S100A7AQ86SG5 101 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 TXNDC17Q9BRA2 123 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 CDC42EP3Q9UKI2 254 aa10.94□□□□□ -0.66
SS18-201ENST00000269137 HIVEP1P15822 2718 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 TGOLN2O43493 480 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 CD81P60033 236 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
SS18-201ENST00000269137 SRD5A1P18405 259 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 SLC35B1P78383 322 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 SOHLH1Q5JUK2 328 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 ZNF329Q86UD4 541 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 SHANK2-AS3Q9BTD1 123 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
SS18-201ENST00000269137 PUS1Q9Y606 427 aaKnown RBP eCLIP10.93□□□□□ -0.66
SS18-201ENST00000269137 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.92□□□□□ -0.66
SS18-201ENST00000269137 TMEM250H0YL14 139 aa10.92□□□□□ -0.66
SS18-201ENST00000269137 USF2Q15853 346 aaPredicted RBP10.92□□□□□ -0.66
SS18-201ENST00000269137 CYB561D1Q8N8Q1 229 aa10.92□□□□□ -0.66
SS18-201ENST00000269137 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
SS18-201ENST00000269137 OR51M1Q9H341 326 aa10.92□□□□□ -0.66
SS18-201ENST00000269137 BAHCC1Q9P281 2608 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 H3BRN7 92 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 ELANEP08246 267 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 CD99P14209 185 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 UBE2G2P60604 165 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 RPL15P61313 204 aaKnown RBP10.91□□□□□ -0.66
SS18-201ENST00000269137 UBE2L3P68036 154 aaKnown RBP10.91□□□□□ -0.66
SS18-201ENST00000269137 RELQ04864 619 aaPredicted RBP10.91□□□□□ -0.66
SS18-201ENST00000269137 FOXE3Q13461 319 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 FAM209BQ5JX69 171 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 ZNF343Q6P1L6 599 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 TEX38Q6PEX7 206 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 SERTAD4Q9NUC0 356 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 TMEM14CQ9P0S9 112 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 NF1P21359 2839 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 FAM181BA6NEQ2 426 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 CST9LP1Q5W188 147 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 TOMM20LQ6UXN7 152 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 RNF152Q8N8N0 203 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 ZNF418Q8TF45 676 aaPredicted RBP10.91□□□□□ -0.66
SS18-201ENST00000269137 FXYD5Q96DB9 178 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 OR4F4Q96R69 305 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 SMCO4Q9NRQ5 59 aa10.91□□□□□ -0.66
SS18-201ENST00000269137 YTHDF2Q9Y5A9 579 aaKnown RBP10.91□□□□□ -0.66
SS18-201ENST00000269137 NSD1Q96L73 2696 aaPredicted RBP10.9□□□□□ -0.66
SS18-201ENST00000269137 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 BMPR1BO00238 502 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 PDE6DO43924 150 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 RNASE1P07998 156 aaKnown RBP10.9□□□□□ -0.66
SS18-201ENST00000269137 OR10J4P0C629 311 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 PYYP10082 97 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 GP9P14770 177 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 S100A7P31151 101 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 KIAA0141Q14154 515 aaPredicted RBP10.9□□□□□ -0.66
SS18-201ENST00000269137 AWAT1Q58HT5 328 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 GNB4Q9HAV0 340 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 RNF24Q9Y225 148 aa10.9□□□□□ -0.66
SS18-201ENST00000269137 ARL3P36405 182 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 ATP5G3P48201 142 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 LEMD1Q68G75 181 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 LCNL1Q6ZST4 164 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 OR4X2Q8NGF9 303 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 MYOZ3Q8TDC0 251 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 RABAC1Q9UI14 185 aa10.89□□□□□ -0.67
SS18-201ENST00000269137 C7orf77A4D0Y5 90 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 ZNF98A6NK75 572 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 PPP5D1E7EU14 171 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 F6UZH7 168 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 HILS1P60008 231 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 SMUG1Q53HV7 270 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 C10orf99Q6UWK7 81 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 Q6ZSV7 163 aa10.88□□□□□ -0.67
SS18-201ENST00000269137 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms